RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 RFXANKO14593 260 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 ARHGEF9O43307 516 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 KLF4O43474 513 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 DSCAMO60469 2012 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 CYP7B1O75881 506 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 H6PDO95479 791 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 LOXP28300 417 aaPredicted RBP11.22□□□□□ -0.61
SNX6-207ENST00000556303 CHRNEQ04844 493 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 FUT5Q11128 374 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 MERTKQ12866 999 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 SYT14P1Q58G82 188 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 SFRP5Q5T4F7 317 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 AGBL2Q5U5Z8 902 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 PRSS57Q6UWY2 283 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 ZNF550Q7Z398 422 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 CXorf67Q86X51 503 aaPredicted RBP11.22□□□□□ -0.61
SNX6-207ENST00000556303 RNF130Q86XS8 419 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 ARFGAP2Q8N6H7 521 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 ZNF563Q8TA94 476 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 MGARPQ8TDB4 240 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 HSD17B8Q92506 261 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 RAB8BQ92930 207 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 ZNF524Q96C55 264 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 PSD2Q9BQI7 771 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 CCDC106Q9BWC9 280 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 ACTR6Q9GZN1 396 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 RMND5AQ9H871 391 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 NGBQ9NPG2 151 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 DLL4Q9NR61 685 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 SDR39U1Q9NRG7 319 aaPredicted RBP11.22□□□□□ -0.61
SNX6-207ENST00000556303 CALML5Q9NZT1 146 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 CHRNA9Q9UGM1 479 aa11.22□□□□□ -0.61
SNX6-207ENST00000556303 IGKV3D-15A0A087WSY6 115 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 GOLGA8QA0A0J9YX86 632 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 CENPVL1A0A0U1RR11 272 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 A0A1W2PNR3 127 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 PRAMEF27A3QJZ7 478 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 GOLGA8OA6NCC3 632 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 GOLGA8NF8WBI6 632 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 UBDO15205 165 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 ZNF208O43345 1280 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 GCM2O75603 506 aaPredicted RBP11.21□□□□□ -0.61
SNX6-207ENST00000556303 TGDSO95455 350 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 PMS2P2O95744 297 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 DBIP07108 87 aaKnown RBP11.21□□□□□ -0.61
SNX6-207ENST00000556303 THBDP07204 575 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 KITP10721 976 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 UQCRBP14927 111 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 RPS4Y1P22090 263 aaKnown RBP11.21□□□□□ -0.61
SNX6-207ENST00000556303 MRPL19P49406 292 aaKnown RBP11.21□□□□□ -0.61
SNX6-207ENST00000556303 DIO1P49895 249 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 CASP9P55211 416 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 NME5P56597 212 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 IRX1P78414 480 aaPredicted RBP11.21□□□□□ -0.61
SNX6-207ENST00000556303 RASGEF1BQ0VAM2 473 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 FOXD4Q12950 439 aaPredicted RBP11.21□□□□□ -0.61
SNX6-207ENST00000556303 NXNQ6DKJ4 435 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 Q6ZT83 130 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 C22orf34Q6ZV56 151 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 MTDHQ86UE4 582 aaKnown RBP11.21□□□□□ -0.61
SNX6-207ENST00000556303 PEX5LQ8IYB4 626 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 ZNF440Q8IYI8 595 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 ATP6V1C2Q8NEY4 427 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 ZNF75CPQ92670 426 aaPredicted RBP11.21□□□□□ -0.61
SNX6-207ENST00000556303 ZG16BQ96DA0 208 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 ZHX1-C8orf76Q96EF9 292 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 ZC3HAV1LQ96H79 300 aaKnown RBP11.21□□□□□ -0.61
SNX6-207ENST00000556303 OR5B2Q96R09 309 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 SLC38A1Q9H2H9 487 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 C12orf49Q9H741 205 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 EMC3Q9P0I2 261 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 P2RX2Q9UBL9 471 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 TRAPPC4Q9Y296 219 aa11.21□□□□□ -0.61
SNX6-207ENST00000556303 CADP27708 2225 aa11.21□□□□□ -0.62
SNX6-207ENST00000556303 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.2□□□□□ -0.62
SNX6-207ENST00000556303 SULT2B1O00204 365 aa11.2□□□□□ -0.62
SNX6-207ENST00000556303 SMAD9O15198 467 aaKnown RBP11.2□□□□□ -0.62
SNX6-207ENST00000556303 EIF1BO60739 113 aaKnown RBP11.2□□□□□ -0.62
SNX6-207ENST00000556303 SMPD2O60906 423 aa11.2□□□□□ -0.62
SNX6-207ENST00000556303 NR2F1P10589 423 aa11.2□□□□□ -0.62
SNX6-207ENST00000556303 PAX1P15863 534 aa11.2□□□□□ -0.62
SNX6-207ENST00000556303 IL7RP16871 459 aa11.2□□□□□ -0.62
SNX6-207ENST00000556303 CDKN2CP42773 168 aa11.2□□□□□ -0.62
SNX6-207ENST00000556303 SLC1A3P43003 542 aa11.2□□□□□ -0.62
SNX6-207ENST00000556303 OR3A2P47893 321 aa11.2□□□□□ -0.62
SNX6-207ENST00000556303 RNF144AP50876 292 aaPredicted RBP11.2□□□□□ -0.62
SNX6-207ENST00000556303 NKX6-1P78426 367 aaPredicted RBP11.2□□□□□ -0.62
SNX6-207ENST00000556303 ITGADQ13349 1161 aa11.2□□□□□ -0.62
SNX6-207ENST00000556303 SYPL1Q16563 259 aa11.2□□□□□ -0.62
SNX6-207ENST00000556303 SLC9B1Q4ZJI4 515 aa11.2□□□□□ -0.62
SNX6-207ENST00000556303 ANKRD34AQ69YU3 496 aa11.2□□□□□ -0.62
SNX6-207ENST00000556303 NUFIP2Q7Z417 695 aaKnown RBP11.2□□□□□ -0.62
SNX6-207ENST00000556303 GALNT5Q7Z7M9 940 aa11.2□□□□□ -0.62
SNX6-207ENST00000556303 MIER2Q8N344 545 aa11.2□□□□□ -0.62
SNX6-207ENST00000556303 KISS1RQ969F8 398 aaPredicted RBP11.2□□□□□ -0.62
SNX6-207ENST00000556303 ITCHQ96J02 903 aa11.2□□□□□ -0.62
SNX6-207ENST00000556303 C7orf26Q96N11 449 aa11.2□□□□□ -0.62
SNX6-207ENST00000556303 TMEM204Q9BSN7 226 aa11.2□□□□□ -0.62
SNX6-207ENST00000556303 INPP5KQ9BT40 448 aa11.2□□□□□ -0.62
SNX6-207ENST00000556303 TMEM45AQ9NWC5 275 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms