RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-238	ENST00000556288		Q9N2J8	555 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	SLCO1B3	Q9NPD5	702 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	SERHL	Q9NQF3	203 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	SDHAF3	Q9NRP4	125 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	DEPP	Q9NTK1	212 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	ZCCHC3	Q9NUD5	404 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	B4GALT7	Q9UBV7	327 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	ATP6V1H	Q9UI12	483 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	PRDM4	Q9UKN5	801 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	BOK	Q9UMX3	212 aa	Predicted RBP	4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	USH1C	Q9Y6N9	552 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	GCN1	Q92616	2671 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	POLE	Q07864	2286 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	ZNF462	Q96JM2	2506 aa		4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	SPTBN1	Q01082	2364 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-238	ENST00000556288	FASN	P49327	2511 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	C15orf38-AP3S2	A0A0A6YYH1	394 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	TRGV5	A0A0B4J1U4	118 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288		A0A0G2JND7	137 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288		A0A1B0GUH1	482 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288		A1L4Q6	167 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	MBD3L3	A6NE82	208 aa	Predicted RBP	4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	FRG2C	A6NGY1	282 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288		E9PBE3	544 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	ACOX3	O15254	700 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	PLOD3	O60568	738 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	UGT2B11	O75310	529 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	SNN	O75324	88 aa	Predicted RBP	4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	NADK	O95544	446 aa	Predicted RBP	4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	NUDT14	O95848	222 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	NUDT3	O95989	172 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	HMGN2	P05204	90 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	RFPL3S	P0C7P2	107 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	CYP4B1	P13584	511 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	ATP6V1C1	P21283	382 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	BMP5	P22003	454 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	GCK	P35557	465 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	GNAL	P38405	381 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	CASP3	P42574	277 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	POLR2J	P52435	117 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	CLNS1A	P54105	237 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	PSMD4	P55036	377 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	MRPS22	P82650	360 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	COL10A1	Q03692	680 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	EFR3A	Q14156	821 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	LASP1	Q14847	261 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	GPR68	Q15743	365 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	NTRK2	Q16620	822 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	FAM174B	Q3ZCQ3	159 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	VPS26B	Q4G0F5	336 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	GPAT3	Q53EU6	434 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	AGK	Q53H12	422 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	CCNJ	Q5T5M9	372 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	SLC30A6	Q6NXT4	461 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	EPGN	Q6UW88	154 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	CHMP1B	Q7LBR1	199 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	C16orf62	Q7Z3J2	963 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	YRDC	Q86U90	279 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	MARCH3	Q86UD3	253 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	DTX2	Q86UW9	622 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	SLC15A3	Q8IY34	581 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	DND1	Q8IYX4	353 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	GHDC	Q8N2G8	530 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	FBXW8	Q8N3Y1	598 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	ARFGAP2	Q8N6H7	521 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	TMEM251	Q8N6I4	163 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	NATD1	Q8N6N6	113 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	GATS	Q8NAP1	163 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	ST6GALNAC3	Q8NDV1	305 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	OR4K17	Q8NGC6	315 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	OR14L1P	Q8NHC6	308 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	PNPT1	Q8TCS8	783 aa	Known RBP	4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	SPPL2A	Q8TCT8	520 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	DUSP19	Q8WTR2	217 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	CKAP2	Q8WWK9	683 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	XAGE5	Q8WWM1	108 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	CDS1	Q92903	461 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	RFK	Q969G6	155 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	CTHRC1	Q96CG8	243 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	COQ8B	Q96D53	544 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	C11orf24	Q96F05	449 aa	Predicted RBP	4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	SLC35G5	Q96KT7	338 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	ZNF597	Q96LX8	424 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	GPR137	Q96N19	417 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	OR52B2	Q96RD2	323 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	PANX1	Q96RD7	426 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	SH3GL2	Q99962	352 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	INPP5K	Q9BT40	448 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	TTTY12	Q9BZ98	90 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	TBL1XR1	Q9BZK7	514 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	DSN1	Q9H410	356 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	CXorf36	Q9H7Y0	433 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	IL1RL2	Q9HB29	575 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	TCF7L2	Q9NQB0	619 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	ZNF446	Q9NWS9	450 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	GIN1	Q9NXP7	522 aa		4.23	□□□□□ -1.73
ATXN3-238	ENST00000556288	TAS2R7	Q9NYW3	318 aa		4.23	□□□□□ -1.73

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