RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 MSLNLQ96KJ4 702 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 OR2A5Q96R48 311 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 NMNAT3Q96T66 252 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 G6PC3Q9BUM1 346 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 KATNB1Q9BVA0 655 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 C11orf54Q9H0W9 315 aaPredicted RBP13.75□□□□□ -0.21
NEK9-209ENST00000556170 C19orf53Q9UNZ5 99 aaPredicted RBP13.75□□□□□ -0.21
NEK9-209ENST00000556170 DOCK9Q9BZ29 2069 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 FAM172BPA6NC97 362 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 ANXA2P2A6NMY6 339 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 ANXA2P07355 339 aaKnown RBP13.75□□□□□ -0.21
NEK9-209ENST00000556170 PIPP12273 146 aaPredicted RBP13.75□□□□□ -0.21
NEK9-209ENST00000556170 HES5Q5TA89 166 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 GKN2Q86XP6 184 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 FBRSQ9HAH7 460 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 KCND3Q9UK17 655 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 FBXL4Q9UKA2 621 aa13.75□□□□□ -0.21
NEK9-209ENST00000556170 FBXO45P0C2W1 286 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 LINC00271P0C7V0 271 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 EIF1AXP47813 144 aaKnown RBP13.74□□□□□ -0.21
NEK9-209ENST00000556170 CSNK1EP49674 416 aaKnown RBP13.74□□□□□ -0.21
NEK9-209ENST00000556170 NR0B1P51843 470 aaKnown RBP13.74□□□□□ -0.21
NEK9-209ENST00000556170 NXNL2Q5VZ03 156 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 GDPD1Q8N9F7 314 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 TRMT10AQ8TBZ6 339 aaKnown RBP13.74□□□□□ -0.21
NEK9-209ENST00000556170 RFT1Q96AA3 541 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 TRMT61AQ96FX7 289 aaKnown RBP13.74□□□□□ -0.21
NEK9-209ENST00000556170 TMEM138Q9NPI0 162 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 CENPMQ9NSP4 180 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 NDUFB11Q9NX14 153 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 LRIT1Q9P2V4 623 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 SLC35A3Q9Y2D2 325 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 PCDHGB7Q9Y5F8 929 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 LYRM1O43325 122 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 AK1P00568 194 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 PSPHP78330 225 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 MRPS21P82921 87 aaKnown RBP13.74□□□□□ -0.21
NEK9-209ENST00000556170 METTL21AQ8WXB1 218 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 C8orf33Q9H7E9 229 aaPredicted RBP13.74□□□□□ -0.21
NEK9-209ENST00000556170 ATXN7L1Q9ULK2 861 aaPredicted RBP13.74□□□□□ -0.21
NEK9-209ENST00000556170 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 TMEM229AB2RXF0 380 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 TOXO94900 526 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 OMPP47874 163 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 PSMD4P55036 377 aaKnown RBP13.74□□□□□ -0.21
NEK9-209ENST00000556170 GAS6Q14393 721 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 SMAD2Q15796 467 aaKnown RBP13.74□□□□□ -0.21
NEK9-209ENST00000556170 ARHGAP11AQ6P4F7 1023 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 TMEM151BQ8IW70 566 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 OR13C5Q8NGS8 318 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 DIO2Q92813 273 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 GHSRQ92847 366 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 TAPBPLQ9BX59 468 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 FAM60AQ9NP50 221 aa13.74□□□□□ -0.21
NEK9-209ENST00000556170 C5orf67F2Z3F1 127 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 RAB3BP20337 219 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 MAKP20794 623 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 SDHBP21912 280 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 FCARP24071 287 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 HTR1FP30939 366 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 HTR2BP41595 481 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 CRYBB2P43320 205 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 CLDN12P56749 244 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 HSD17B12Q53GQ0 312 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 GLCCI1Q86VQ1 547 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.73□□□□□ -0.21
NEK9-209ENST00000556170 GPALPP1Q8IXQ4 340 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 FBLIM1Q8WUP2 373 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 NSMAFQ92636 917 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 SLC25A46Q96AG3 418 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 ORAI1Q96D31 301 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 CNN2Q99439 309 aaKnown RBP13.73□□□□□ -0.21
NEK9-209ENST00000556170 CLEC4MQ9H2X3 399 aaPredicted RBP13.73□□□□□ -0.21
NEK9-209ENST00000556170 RANGRFQ9HD47 186 aaPredicted RBP13.73□□□□□ -0.21
NEK9-209ENST00000556170 FKBP7Q9Y680 259 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 ARRDC5A6NEK1 342 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 EPOPA6NHQ4 379 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 SOX1O00570 391 aaPredicted RBP13.73□□□□□ -0.21
NEK9-209ENST00000556170 PRAMEF2O60811 474 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 KCNK2O95069 426 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 GABRG2P18507 467 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 TSFMP43897 325 aaKnown RBP13.73□□□□□ -0.21
NEK9-209ENST00000556170 GPR143P51810 404 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 YPEL5P62699 121 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 ZIC1Q15915 447 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 ZNF425Q6IV72 752 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 C19orf47Q8N9M1 422 aaKnown RBP13.73□□□□□ -0.21
NEK9-209ENST00000556170 ZNF511Q8NB15 262 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 TEAD3Q99594 435 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 RNF121Q9H920 327 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 SLC2A4RGQ9NR83 387 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 ING4Q9UNL4 249 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 CACNA1EQ15878 2313 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 CDHR4A6H8M9 788 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 LIMS3P0CW19 117 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 LIMS4P0CW20 117 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 KIAA1024LP59773 190 aa13.73□□□□□ -0.21
NEK9-209ENST00000556170 SFRP4Q6FHJ7 346 aaPredicted RBP13.73□□□□□ -0.21
NEK9-209ENST00000556170 ZNF770Q6IQ21 691 aaPredicted RBP13.73□□□□□ -0.21
NEK9-209ENST00000556170 BAHD1Q8TBE0 780 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms