RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 Q71RC1 249 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 MED25Q71SY5 747 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 RRM2BQ7LG56 351 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 WDR53Q7Z5U6 358 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 RANBP3LQ86VV4 465 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 VRK2Q86Y07 508 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF619Q8N2I2 560 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 PARP8Q8N3A8 854 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 METTL27Q8N6F8 245 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 AQP11Q8NBQ7 271 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 TOR1AIP2Q8NFQ8 470 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 OR7G1Q8NGA0 311 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 OR52R1Q8NGF1 315 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 OR1L3Q8NH93 324 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 WFDC12Q8WWY7 111 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 HOXB13Q92826 284 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 SLC38A4Q969I6 547 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 DGCR14Q96DF8 476 aaKnown RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 HRASLS5Q96KN8 279 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 PRRC1Q96M27 445 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 SLC46A1Q96NT5 459 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 PITX2Q99697 317 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 ARHGDIGQ99819 225 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 LMF2Q9BU23 707 aaKnown RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 G6PC3Q9BUM1 346 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 JAM3Q9BX67 310 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 UCK2Q9BZX2 261 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 SLC7A5P2Q9GIP4 190 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 POLR2J2Q9GZM3 115 aaKnown RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF350Q9GZX5 532 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 POLR2J3Q9H1A7 115 aaKnown RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 ANKRD19PQ9H560 264 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 ZMAT4Q9H898 229 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 POLR1BQ9H9Y6 1135 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 FGF21Q9NSA1 209 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 RHCGQ9UBD6 479 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 PRODH2Q9UF12 536 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 TUBD1Q9UJT1 453 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 ACAD8Q9UKU7 415 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 MKLN1Q9UL63 735 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 NDRG4Q9ULP0 352 aaKnown RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 ZNF443Q9Y2A4 671 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-204ENST00000555890 SNX5Q9Y5X3 404 aa6.28□□□□□ -1.4
SLIRP-204ENST00000555890 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.27□□□□□ -1.414e-15■■■■■ 30.4
SLIRP-204ENST00000555890 TRBV4-1A0A0J9YWV2 114 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 A0A1B0GX78 115 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 SH3PXD2BA1X283 911 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 EME2A4GXA9 379 aaPredicted RBP6.27□□□□□ -1.41
SLIRP-204ENST00000555890 CCDC160A6NGH7 325 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 TRIM64CA6NLI5 447 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 CDRT15L2A8MXV6 281 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 C9orf172C9J069 976 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 MPZL2O60487 215 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 MRPS14O60783 128 aaKnown RBP6.27□□□□□ -1.41
SLIRP-204ENST00000555890 NME6O75414 186 aaPredicted RBP6.27□□□□□ -1.41
SLIRP-204ENST00000555890 CDC123O75794 336 aaPredicted RBP6.27□□□□□ -1.41
SLIRP-204ENST00000555890 ANGPTL1O95841 491 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 GASTP01350 101 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 HRGP04196 525 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 RPLP0P05388 317 aaKnown RBP6.27□□□□□ -1.41
SLIRP-204ENST00000555890 CT62P0C5K7 136 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 OSMP13725 252 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 FOLR1P15328 257 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 KLK2P20151 261 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 GSTM3P21266 225 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 CBLP22681 906 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 CRHBPP24387 322 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 NOS3P29474 1203 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 PTGER4P35408 488 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 GGT2P36268 569 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 MAP3K8P41279 467 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 ALDH3B2P48448 385 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 ART1P52961 327 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 CRISP1P54107 249 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 PSMD4P55036 377 aaKnown RBP6.27□□□□□ -1.41
SLIRP-204ENST00000555890 CDH15P55291 814 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 CCL7P80098 99 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 COX10Q12887 443 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 FOXD4Q12950 439 aaPredicted RBP6.27□□□□□ -1.41
SLIRP-204ENST00000555890 PDCD1Q15116 288 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 SYT16Q17RD7 645 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 NADK2Q4G0N4 442 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 GUSBP11Q6P575 273 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 PODNL1Q6PEZ8 512 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 BORAQ6PGQ7 559 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF773Q6PK81 442 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 BEND4Q6ZU67 534 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 PLEKHM3Q6ZWE6 761 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 OLIG3Q7RTU3 272 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 SATL1Q86VE3 508 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 RBM45Q8IUH3 476 aaKnown RBP6.27□□□□□ -1.41
SLIRP-204ENST00000555890 LACC1Q8IV20 430 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 Q8N1Y9 231 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 ARMC10Q8N2F6 343 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 SIMC1Q8NDZ2 872 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 BPIFB6Q8NFQ5 453 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 OR4D9Q8NGE8 314 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 OR9Q2Q8NGE9 314 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 OR4D11Q8NGI4 311 aa6.27□□□□□ -1.41
SLIRP-204ENST00000555890 OR6T1Q8NGN1 323 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms