RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 KIR2DL1P43626 348 aaPredicted RBP6.47□□□□□ -1.37
TDP1-213ENST00000555880 FXYD6P3P58550 94 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 PPP2CBP62714 309 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 PPP2CAP67775 309 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 LGALS3BPQ08380 585 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 FZD5Q13467 585 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 GPR176Q14439 515 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 BTBD16Q32M84 506 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 FCRLBQ6BAA4 426 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 IL20RBQ6UXL0 311 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 BAIAP2L2Q6UXY1 529 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 TRILQ7L0X0 811 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 LRRC17Q8N6Y2 441 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 TEX19Q8NA77 164 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 FAM98AQ8NCA5 519 aaKnown RBP6.47□□□□□ -1.37
TDP1-213ENST00000555880 OR51A7Q8NH64 312 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 DEDD2Q8WXF8 326 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 FAM131CQ96AQ9 280 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 PHF21AQ96BD5 680 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 HYLS1Q96M11 299 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 LRFN5Q96NI6 719 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 MYADMQ96S97 322 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 CCDC3Q9BQI4 270 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 HCAR1Q9BXC0 346 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 PLA2G2FQ9BZM2 168 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 FAM117AQ9C073 453 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.47□□□□□ -1.37
TDP1-213ENST00000555880 DPAGT1Q9H3H5 408 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ADGRL4Q9HBW9 690 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 CAPN10Q9HC96 672 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 HAO2Q9NYQ3 351 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ACTR10Q9NZ32 417 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 COPZ2Q9P299 210 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 RPS6KB2Q9UBS0 482 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ING4Q9UNL4 249 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 ENTPD2Q9Y5L3 495 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 NPFFR2Q9Y5X5 522 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 SIRT4Q9Y6E7 314 aaPredicted RBP6.47□□□□□ -1.37
TDP1-213ENST00000555880 FANCMQ8IYD8 2048 aa6.47□□□□□ -1.37
TDP1-213ENST00000555880 MKI67P46013 3256 aaKnown RBP6.46□□□□□ -1.37
TDP1-213ENST00000555880 TRANK1O15050 2925 aa6.46□□□□□ -1.37
TDP1-213ENST00000555880 TRAV1-2A0A0B4J238 106 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 A0A0B4J2E0 115 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 A0A1B0GX12 115 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 SLC9B1P1A6NJY1 282 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 C2orf74A8MZ97 194 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 H0YGG7 62 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 K7EQS6 105 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 DVL2O14641 736 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 FLRT2O43155 660 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 NARSO43776 548 aaKnown RBP6.46□□□□□ -1.38
TDP1-213ENST00000555880 FZD7O75084 574 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 ZNF780AO75290 641 aaPredicted RBP6.46□□□□□ -1.38
TDP1-213ENST00000555880 OR2B3O76000 313 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 LYPD3O95274 346 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 HOXB2P14652 356 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 AHCYP23526 432 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 STOMP27105 288 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 ACVR1BP36896 505 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 GBX2P52951 348 aaPredicted RBP6.46□□□□□ -1.38
TDP1-213ENST00000555880 ARF3P61204 181 aaPredicted RBP6.46□□□□□ -1.38
TDP1-213ENST00000555880 E2F1Q01094 437 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 ILF3Q12906 894 aaKnown RBP eCLIP6.46□□□□□ -1.382e-6■□□□□ 9.3
TDP1-213ENST00000555880 COL9A2Q14055 689 aaPredicted RBP6.46□□□□□ -1.38
TDP1-213ENST00000555880 CRMP1Q14194 572 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 GPR18Q14330 331 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 EXOSC7Q15024 291 aaKnown RBP6.46□□□□□ -1.38
TDP1-213ENST00000555880 NTRK2Q16620 822 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 ZSWIM7Q19AV6 140 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 PRICKLE4Q2TBC4 344 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 ACSM3Q53FZ2 586 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 EXOSC6Q5RKV6 272 aaKnown RBP6.46□□□□□ -1.38
TDP1-213ENST00000555880 MANEAQ5SRI9 462 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 FCRL6Q6DN72 434 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 CREB3L2Q70SY1 520 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 ZNF767PQ75MW2 155 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 PXKQ7Z7A4 578 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 ABI3BPQ7Z7G0 1075 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 LUZP2Q86TE4 346 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 NR2C2APQ86WQ0 139 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 LINC00528Q8N1L1 170 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 MEIOBQ8N635 442 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 POMGNT2Q8NAT1 580 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 FLVCR1-AS1Q8TAF5 88 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 ZFPM2Q8WW38 1151 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 GHSRQ92847 366 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 PTP4A1Q93096 173 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 TSACCQ96A04 125 aaPredicted RBP6.46□□□□□ -1.38
TDP1-213ENST00000555880 ELSPBP1Q96BH3 223 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 CNN2Q99439 309 aaKnown RBP6.46□□□□□ -1.38
TDP1-213ENST00000555880 PBX4Q9BYU1 374 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 ENKD1Q9H0I2 346 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 SLC6A17Q9H1V8 727 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 ERVMER34-1Q9H9K5 563 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 GALNT9Q9HCQ5 603 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 DIABLOQ9NR28 239 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 MRPL39Q9NYK5 338 aaKnown RBP6.46□□□□□ -1.38
TDP1-213ENST00000555880 USP36Q9P275 1121 aaKnown RBP6.46□□□□□ -1.38
TDP1-213ENST00000555880 LAMA3Q16787 3333 aa6.46□□□□□ -1.38
TDP1-213ENST00000555880 LOC105369274A0A096LPK9 316 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms