RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 SIAH2O43255 324 aa16.4■□□□□ 0.22
NEDD1-208ENST00000555806 ETFAP13804 333 aa16.4■□□□□ 0.22
NEDD1-208ENST00000555806 IL7RP16871 459 aa16.4■□□□□ 0.22
NEDD1-208ENST00000555806 APOBEC1P41238 236 aaKnown RBP16.4■□□□□ 0.22
NEDD1-208ENST00000555806 SYT14P1Q58G82 188 aa16.4■□□□□ 0.22
NEDD1-208ENST00000555806 AP1ARQ63HQ0 302 aa16.4■□□□□ 0.22
NEDD1-208ENST00000555806 STAC2Q6ZMT1 411 aa16.4■□□□□ 0.22
NEDD1-208ENST00000555806 HDXQ7Z353 690 aa16.4■□□□□ 0.22
NEDD1-208ENST00000555806 NUFIP2Q7Z417 695 aaKnown RBP16.4■□□□□ 0.22
NEDD1-208ENST00000555806 GRINAQ7Z429 371 aa16.4■□□□□ 0.22
NEDD1-208ENST00000555806 CMIPQ8IY22 773 aa16.4■□□□□ 0.22
NEDD1-208ENST00000555806 AURKBQ96GD4 344 aaPredicted RBP16.4■□□□□ 0.22
NEDD1-208ENST00000555806 TACO1Q9BSH4 297 aaKnown RBP16.4■□□□□ 0.22
NEDD1-208ENST00000555806 MTHFD2LQ9H903 347 aaPredicted RBP16.4■□□□□ 0.22
NEDD1-208ENST00000555806 TPT1P8Q9HAU6 139 aa16.4■□□□□ 0.22
NEDD1-208ENST00000555806 GP6Q9HCN6 339 aa16.4■□□□□ 0.22
NEDD1-208ENST00000555806 HIVEP1P15822 2718 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 SULT2B1O00204 365 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 AP3D1O14617 1153 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 TGDSO95455 350 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 BCHEP06276 602 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 DBIP07108 87 aaKnown RBP16.39■□□□□ 0.21
NEDD1-208ENST00000555806 FESP07332 822 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 YES1P07947 543 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 ZCCHC18P0CG32 403 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 PPP3CBP16298 524 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 MAGEA8P43361 318 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 IDH2P48735 452 aaKnown RBP16.39■□□□□ 0.21
NEDD1-208ENST00000555806 DIO1P49895 249 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 DSTNP60981 165 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 CSNK2A1P68400 391 aaPredicted RBP16.39■□□□□ 0.21
NEDD1-208ENST00000555806 PLAURQ03405 335 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 RASGEF1BQ0VAM2 473 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 TFAP2EQ6VUC0 442 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 TMPPEQ6ZT21 453 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 PEX5LQ8IYB4 626 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 ALPK1Q96QP1 1244 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 EBF4Q9BQW3 602 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 CCDC106Q9BWC9 280 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 ACTR6Q9GZN1 396 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 CXXC4Q9H2H0 198 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 CALML5Q9NZT1 146 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 CHRNA9Q9UGM1 479 aa16.39■□□□□ 0.21
NEDD1-208ENST00000555806 HMGB1P1B2RPK0 211 aaPredicted RBP16.38■□□□□ 0.21
NEDD1-208ENST00000555806 SMAD9O15198 467 aaKnown RBP16.38■□□□□ 0.21
NEDD1-208ENST00000555806 KLK2P20151 261 aa16.38■□□□□ 0.21
NEDD1-208ENST00000555806 CCNA2P20248 432 aa16.38■□□□□ 0.21
NEDD1-208ENST00000555806 RPS4Y1P22090 263 aaKnown RBP16.38■□□□□ 0.21
NEDD1-208ENST00000555806 IDH3AP50213 366 aa16.38■□□□□ 0.21
NEDD1-208ENST00000555806 MVDP53602 400 aa16.38■□□□□ 0.21
NEDD1-208ENST00000555806 CRISP3P54108 245 aa16.38■□□□□ 0.21
NEDD1-208ENST00000555806 AQP5P55064 265 aa16.38■□□□□ 0.21
NEDD1-208ENST00000555806 DEFB113Q30KQ7 82 aa16.38■□□□□ 0.21
NEDD1-208ENST00000555806 MRPL2Q5T653 305 aaKnown RBP16.38■□□□□ 0.21
NEDD1-208ENST00000555806 SLC2A7Q6PXP3 512 aa16.38■□□□□ 0.21
NEDD1-208ENST00000555806 C22orf34Q6ZV56 151 aa16.38■□□□□ 0.21
NEDD1-208ENST00000555806 WFDC8Q8IUA0 241 aa16.38■□□□□ 0.21
NEDD1-208ENST00000555806 MBD6Q96DN6 1003 aa16.38■□□□□ 0.21
NEDD1-208ENST00000555806 DNAJA3Q96EY1 480 aa16.38■□□□□ 0.21
NEDD1-208ENST00000555806 PSD2Q9BQI7 771 aa16.38■□□□□ 0.21
NEDD1-208ENST00000555806 CACYBPQ9HB71 228 aaKnown RBP16.38■□□□□ 0.21
NEDD1-208ENST00000555806 INTS9Q9NV88 658 aaKnown RBP16.38■□□□□ 0.21
NEDD1-208ENST00000555806 GPR52Q9Y2T5 361 aa16.38■□□□□ 0.21
NEDD1-208ENST00000555806 TMEM247A6NEH6 219 aa16.37■□□□□ 0.21
NEDD1-208ENST00000555806 CYTIPO60759 359 aa16.37■□□□□ 0.21
NEDD1-208ENST00000555806 ADAM11O75078 769 aa16.37■□□□□ 0.21
NEDD1-208ENST00000555806 THBDP07204 575 aa16.37■□□□□ 0.21
NEDD1-208ENST00000555806 UQCRBP14927 111 aa16.37■□□□□ 0.21
NEDD1-208ENST00000555806 HTR3AP46098 478 aa16.37■□□□□ 0.21
NEDD1-208ENST00000555806 PPP2R2AP63151 447 aa16.37■□□□□ 0.21
NEDD1-208ENST00000555806 LIN52Q52LA3 116 aa16.37■□□□□ 0.21
NEDD1-208ENST00000555806 CXorf67Q86X51 503 aaPredicted RBP16.37■□□□□ 0.21
NEDD1-208ENST00000555806 VRK2Q86Y07 508 aa16.37■□□□□ 0.21
NEDD1-208ENST00000555806 OR52P1PQ8NH57 321 aa16.37■□□□□ 0.21
NEDD1-208ENST00000555806 GTF2H4Q92759 462 aa16.37■□□□□ 0.21
NEDD1-208ENST00000555806 PMM1Q92871 262 aa16.37■□□□□ 0.21
NEDD1-208ENST00000555806 ZNF775Q96BV0 537 aaPredicted RBP16.37■□□□□ 0.21
NEDD1-208ENST00000555806 ZHX1-C8orf76Q96EF9 292 aa16.37■□□□□ 0.21
NEDD1-208ENST00000555806 CCDC28BQ9BUN5 200 aa16.37■□□□□ 0.21
NEDD1-208ENST00000555806 OR11A1Q9GZK7 315 aa16.37■□□□□ 0.21
NEDD1-208ENST00000555806 UBTD1Q9HAC8 227 aa16.37■□□□□ 0.21
NEDD1-208ENST00000555806 BCO1Q9HAY6 547 aa16.37■□□□□ 0.21
NEDD1-208ENST00000555806 TMED7-TICAM2A0A0A6YYA0 188 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 CFAP73A6NFT4 308 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 NR5A2O00482 541 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 PSMB1P20618 241 aaKnown RBP16.36■□□□□ 0.21
NEDD1-208ENST00000555806 IL32P24001 234 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 MRPL19P49406 292 aaKnown RBP16.36■□□□□ 0.21
NEDD1-208ENST00000555806 POLR2HP52434 150 aaKnown RBP16.36■□□□□ 0.21
NEDD1-208ENST00000555806 MAPK11Q15759 364 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 BEX5Q5H9J7 111 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 RPS26P11Q5JNZ5 115 aaPredicted RBP16.36■□□□□ 0.21
NEDD1-208ENST00000555806 ALKBH2Q6NS38 261 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 ZNF836Q6ZNA1 936 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 ADGRG3Q86Y34 549 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 STEAP2Q8NFT2 490 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 SLC38A5Q8WUX1 472 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 TMEM19Q96HH6 336 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 ARL5BQ96KC2 179 aa16.36■□□□□ 0.21
NEDD1-208ENST00000555806 HS3ST6Q96QI5 342 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms