RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 SIRT4Q9Y6E7 314 aaPredicted RBP22.3■■□□□ 1.16
TMEM260-207ENST00000555497 OIP5O43482 229 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 SPNP16150 400 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 PAICSP22234 425 aaKnown RBP22.3■■□□□ 1.16
TMEM260-207ENST00000555497 SLC2A5P22732 501 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 FGF9P31371 208 aaPredicted RBP22.3■■□□□ 1.16
TMEM260-207ENST00000555497 CSF2RBP32927 897 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 SLC9A3P48764 834 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 MED25Q71SY5 747 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 CMIPQ8IY22 773 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 SMAP2Q8WU79 429 aaPredicted RBP22.3■■□□□ 1.16
TMEM260-207ENST00000555497 DNASE2BQ8WZ79 361 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 SHDQ96IW2 340 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 RPS6KB2Q9UBS0 482 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 PRODH2Q9UF12 536 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 ZNF229Q9UJW7 825 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 V9GYH0 126 aa22.3■■□□□ 1.16
TMEM260-207ENST00000555497 TRDV1A0A1B0GX56 115 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 EFCAB7A8K855 629 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 AKAP8O43823 692 aaKnown RBP22.29■■□□□ 1.16
TMEM260-207ENST00000555497 GIMD1P0DJR0 217 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 CAV3P56539 151 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 HSD11B2P80365 405 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 CD300CQ08708 224 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 RTL4Q6ZR62 310 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 OR4C6Q8NH72 309 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 HTRA1Q92743 480 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 MED18Q9BUE0 208 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 MIXL1Q9H2W2 232 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 C14orf119Q9NWQ9 140 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 LOC110117498-PIK3R3F6TDL0 507 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 SOX1O00570 391 aaPredicted RBP22.29■■□□□ 1.16
TMEM260-207ENST00000555497 FOLR1P15328 257 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 RUNX1T1Q06455 604 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 CD226Q15762 336 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 ZMAT1Q5H9K5 638 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 CAMKK1Q8N5S9 505 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 OR5M3Q8NGP4 307 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 ART5Q96L15 291 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 PELOQ9BRX2 385 aaKnown RBP22.29■■□□□ 1.16
TMEM260-207ENST00000555497 ALG8Q9BVK2 526 aa22.29■■□□□ 1.16
TMEM260-207ENST00000555497 NXF5Q9H1B4 397 aaKnown RBP22.29■■□□□ 1.16
TMEM260-207ENST00000555497 A0A1B0GVT2 93 aa22.28■■□□□ 1.16
TMEM260-207ENST00000555497 SHISA3A0PJX4 238 aa22.28■■□□□ 1.16
TMEM260-207ENST00000555497 RIIAD1A6NNX1 92 aa22.28■■□□□ 1.16
TMEM260-207ENST00000555497 A8MU76 341 aa22.28■■□□□ 1.16
TMEM260-207ENST00000555497 DVL2O14641 736 aa22.28■■□□□ 1.16
TMEM260-207ENST00000555497 BCAT2O15382 392 aaPredicted RBP22.28■■□□□ 1.16
TMEM260-207ENST00000555497 GYPBP06028 91 aa22.28■■□□□ 1.16
TMEM260-207ENST00000555497 MRPL3P09001 348 aaKnown RBP22.28■■□□□ 1.16
TMEM260-207ENST00000555497 PEPDP12955 493 aa22.28■■□□□ 1.16
TMEM260-207ENST00000555497 SLC16A1P53985 500 aa22.28■■□□□ 1.16
TMEM260-207ENST00000555497 RPS7P62081 194 aaKnown RBP22.28■■□□□ 1.16
TMEM260-207ENST00000555497 ZSWIM7Q19AV6 140 aa22.28■■□□□ 1.16
TMEM260-207ENST00000555497 AGAP7PQ5VUJ5 663 aa22.28■■□□□ 1.16
TMEM260-207ENST00000555497 TMEM151BQ8IW70 566 aa22.28■■□□□ 1.16
TMEM260-207ENST00000555497 ATP6V1C2Q8NEY4 427 aa22.28■■□□□ 1.16
TMEM260-207ENST00000555497 OR7G1Q8NGA0 311 aa22.28■■□□□ 1.16
TMEM260-207ENST00000555497 RNF31Q96EP0 1072 aa22.28■■□□□ 1.16
TMEM260-207ENST00000555497 SP140LQ9H930 580 aa22.28■■□□□ 1.16
TMEM260-207ENST00000555497 MUTYHQ9UIF7 546 aa22.28■■□□□ 1.16
TMEM260-207ENST00000555497 MPDZO75970 2070 aa22.28■■□□□ 1.16
TMEM260-207ENST00000555497 VCANP13611 3396 aa22.28■■□□□ 1.16
TMEM260-207ENST00000555497 FER1L5A0AVI2 2057 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 A0A087WUJ7 227 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 IGKV3D-11A0A0A0MRZ8 115 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 K7ESF4 209 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 NUDT21O43809 227 aaKnown RBP22.27■■□□□ 1.16
TMEM260-207ENST00000555497 SNX4O95219 450 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 CDC20Q12834 499 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 FNDC7Q5VTL7 733 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 DESI1Q6ICB0 168 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 APOOLQ6UXV4 268 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 OR10H4Q8NGA5 316 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 C3orf49Q96BT1 292 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 WDFY2Q96P53 400 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 OR8D2Q9GZM6 311 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 ABCB9Q9NP78 766 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 ICAM5Q9UMF0 924 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 CMAHPQ9Y471 501 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 HK1P19367 917 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 SLC6A6P31641 620 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 TMPRSS11AQ6ZMR5 421 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 NCCRP1Q6ZVX7 275 aaPredicted RBP22.27■■□□□ 1.16
TMEM260-207ENST00000555497 ZNF524Q96C55 264 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 ITPKCQ96DU7 683 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 ERMAPQ96PL5 475 aaPredicted RBP22.27■■□□□ 1.16
TMEM260-207ENST00000555497 GSTK1Q9Y2Q3 226 aa22.27■■□□□ 1.16
TMEM260-207ENST00000555497 SLC35F4A4IF30 521 aa22.26■■□□□ 1.15
TMEM260-207ENST00000555497 SLC22A31A6NKX4 558 aa22.26■■□□□ 1.15
TMEM260-207ENST00000555497 TTC36A6NLP5 189 aa22.26■■□□□ 1.15
TMEM260-207ENST00000555497 GABRPO00591 440 aa22.26■■□□□ 1.15
TMEM260-207ENST00000555497 DCNP07585 359 aaKnown RBP22.26■■□□□ 1.15
TMEM260-207ENST00000555497 ARL4DP49703 201 aa22.26■■□□□ 1.15
TMEM260-207ENST00000555497 AFF3P51826 1226 aaKnown RBP22.26■■□□□ 1.15
TMEM260-207ENST00000555497 ZNF79Q15937 498 aa22.26■■□□□ 1.15
TMEM260-207ENST00000555497 MARCH9Q86YJ5 346 aa22.26■■□□□ 1.15
TMEM260-207ENST00000555497 FAM71CQ8NEG0 241 aa22.26■■□□□ 1.15
TMEM260-207ENST00000555497 CLDN23Q96B33 292 aa22.26■■□□□ 1.15
TMEM260-207ENST00000555497 SGTBQ96EQ0 304 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms