RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 CDKN2CP42773 168 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 POLR2JP52435 117 aaKnown RBP10.54□□□□□ -0.72
VRK1-204ENST00000555351 MVDP53602 400 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 NR1H2P55055 460 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 CASP9P55211 416 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 NME5P56597 212 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 SYPL1Q16563 259 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 SYT14P1Q58G82 188 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 BEX5Q5H9J7 111 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 TFAP2EQ6VUC0 442 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 C20orf204Q6ZNR8 217 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 MAVSQ7Z434 540 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 MTDHQ86UE4 582 aaKnown RBP10.54□□□□□ -0.72
VRK1-204ENST00000555351 GABRG1Q8N1C3 465 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 LRRC75A-AS1Q8N1F1 130 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 MIER2Q8N344 545 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 ANKFN1Q8N957 763 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 LRRC8CQ8TDW0 803 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 PIGTQ969N2 578 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 ZNF524Q96C55 264 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 ZG16BQ96DA0 208 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 ZHX1-C8orf76Q96EF9 292 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 OR52B2Q96RD2 323 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 PSD2Q9BQI7 771 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 P2RX2Q9UBL9 471 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 CHRNA9Q9UGM1 479 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 TRAPPC4Q9Y296 219 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 DSPPQ9NZW4 1301 aa10.54□□□□□ -0.72
VRK1-204ENST00000555351 HEATR5AQ86XA9 2040 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 TEP1Q99973 2627 aaKnown RBP10.53□□□□□ -0.72
VRK1-204ENST00000555351 SULT2B1O00204 365 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 SMAD9O15198 467 aaKnown RBP10.53□□□□□ -0.72
VRK1-204ENST00000555351 ZNF208O43345 1280 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 GCM2O75603 506 aaPredicted RBP10.53□□□□□ -0.72
VRK1-204ENST00000555351 THBDP07204 575 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 CHRM4P08173 479 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 NR2F1P10589 423 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 CD99P14209 185 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 IL7RP16871 459 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 LOXP28300 417 aaPredicted RBP10.53□□□□□ -0.72
VRK1-204ENST00000555351 OR3A2P47893 321 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 DIO1P49895 249 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 RNF144AP50876 292 aaPredicted RBP10.53□□□□□ -0.72
VRK1-204ENST00000555351 CRISP3P54108 245 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 PPP2R2AP63151 447 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 PLAURQ03405 335 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 RASGEF1BQ0VAM2 473 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 ACKR1Q16570 336 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 EXOC3L2Q2M3D2 409 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 PRAMEF8Q5VWM4 474 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 PRAMEF7Q5VXH5 474 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 Q6ZT83 130 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 OLIG3Q7RTU3 272 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 TUSC5Q8IXB3 177 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 PEX5LQ8IYB4 626 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 ZNF563Q8TA94 476 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 WDR60Q8WVS4 1066 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 SLC35B4Q969S0 331 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 ZBTB9Q96C00 473 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 OR5B2Q96R09 309 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 CCDC28BQ9BUN5 200 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 ACTR6Q9GZN1 396 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 QRSL1Q9H0R6 528 aaKnown RBP10.53□□□□□ -0.72
VRK1-204ENST00000555351 RAD21L1Q9H4I0 556 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 VIPAS39Q9H9C1 493 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 TPT1P8Q9HAU6 139 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 NGBQ9NPG2 151 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 C6orf203Q9P0P8 240 aaPredicted RBP10.53□□□□□ -0.72
VRK1-204ENST00000555351 ING1Q9UK53 422 aaPredicted RBP10.53□□□□□ -0.72
VRK1-204ENST00000555351 GMEB1Q9Y692 573 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 ITPR3Q14573 2671 aa10.53□□□□□ -0.72
VRK1-204ENST00000555351 PRRC2AP48634 2157 aaKnown RBP10.52□□□□□ -0.72
VRK1-204ENST00000555351 A0A0G2JPF8 293 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 A0A1W2PNR3 127 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 TMEM247A6NEH6 219 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 HMGB1P1B2RPK0 211 aaPredicted RBP10.52□□□□□ -0.73
VRK1-204ENST00000555351 HNRNPCL2B2RXH8 293 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 HNRNPCL3B7ZW38 293 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 C9JVG2 144 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 GPR171O14626 319 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 POLR3GO15318 223 aaPredicted RBP10.52□□□□□ -0.73
VRK1-204ENST00000555351 KLF4O43474 513 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 EIF1BO60739 113 aaKnown RBP10.52□□□□□ -0.73
VRK1-204ENST00000555351 HNRNPCL1O60812 293 aaKnown RBP10.52□□□□□ -0.73
VRK1-204ENST00000555351 DIAPH2O60879 1101 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 ANP32DO95626 131 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 GSNP06396 782 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 THBS1P07996 1170 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 TFPTP0C1Z6 253 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 HNRNPCL4P0DMR1 293 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 BMP2P12643 396 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 KLK2P20151 261 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 HOXC12P31275 282 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 SLC1A3P43003 542 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 POLR2HP52434 150 aaKnown RBP10.52□□□□□ -0.73
VRK1-204ENST00000555351 SLC16A1P53985 500 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 STX1BP61266 288 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 FADDQ13158 208 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 ITGADQ13349 1161 aa10.52□□□□□ -0.73
VRK1-204ENST00000555351 POU4F3Q15319 338 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms