RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 THUMPD1Q9NXG2 353 aaKnown RBP9.54□□□□□ -0.88
SHMT2-213ENST00000554600 ZNF232Q9UNY5 417 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 TRIM33Q9UPN9 1127 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 SPIN1Q9Y657 262 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-213ENST00000554600 NF1P21359 2839 aa9.54□□□□□ -0.88
SHMT2-213ENST00000554600 SH3D21A4FU49 640 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 CFAP73A6NFT4 308 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 EVPLLA8MZ36 301 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 SULT2B1O00204 365 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 AP3D1O14617 1153 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 ANGPT2O15123 496 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 SS18L1O75177 396 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-213ENST00000554600 CTAG2O75638 210 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 NTN1O95631 604 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 VIMP08670 466 aaKnown RBP9.53□□□□□ -0.88
SHMT2-213ENST00000554600 NUDT7P0C024 238 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 TROVE2P10155 538 aaKnown RBP eCLIP9.53□□□□□ -0.88
SHMT2-213ENST00000554600 CD8BP10966 210 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 APOBEC1P41238 236 aaKnown RBP9.53□□□□□ -0.88
SHMT2-213ENST00000554600 MVDP53602 400 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 IRX1P78414 480 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-213ENST00000554600 FADDQ13158 208 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 LARS2Q15031 903 aaKnown RBP9.53□□□□□ -0.88
SHMT2-213ENST00000554600 RNPS1Q15287 305 aaKnown RBP9.53□□□□□ -0.88
SHMT2-213ENST00000554600 POU4F3Q15319 338 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 RGNQ15493 299 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 LIN52Q52LA3 116 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 PAGE3Q5JUK9 113 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 ZNF474Q6S9Z5 364 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-213ENST00000554600 ZNF836Q6ZNA1 936 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 GRINAQ7Z429 371 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 STK32CQ86UX6 486 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 ABHD3Q8WU67 409 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 NRGNQ92686 78 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 PMM1Q92871 262 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 MAL2Q969L2 176 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 ZC3HAV1LQ96H79 300 aaKnown RBP9.53□□□□□ -0.88
SHMT2-213ENST00000554600 SIKE1Q9BRV8 207 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 MED18Q9BUE0 208 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 FANCFQ9NPI8 374 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 EXOSC3Q9NQT5 275 aaKnown RBP9.53□□□□□ -0.88
SHMT2-213ENST00000554600 GLRX2Q9NS18 164 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 KLHL28Q9NXS3 571 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 SLAMF8Q9P0V8 285 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 CHRNA9Q9UGM1 479 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 CADP27708 2225 aa9.53□□□□□ -0.88
SHMT2-213ENST00000554600 A0A0G2JPF8 293 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 HNRNPCL2B2RXH8 293 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 HNRNPCL3B7ZW38 293 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 C16orf97H3BN30 126 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 HNRNPCL1O60812 293 aaKnown RBP9.52□□□□□ -0.89
SHMT2-213ENST00000554600 DNAJA2O60884 412 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 PRKD3O94806 890 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 CGAP01215 116 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 TFPTP0C1Z6 253 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 GKN3PP0CG01 181 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 HNRNPCL4P0DMR1 293 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 NID1P14543 1247 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 RPS4Y1P22090 263 aaKnown RBP9.52□□□□□ -0.89
SHMT2-213ENST00000554600 ENPP1P22413 925 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 PPIBP23284 216 aaKnown RBP9.52□□□□□ -0.89
SHMT2-213ENST00000554600 AGTR1P30556 359 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 HTR3AP46098 478 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 RAC3P60763 192 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 COPZ1P61923 177 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 CSNK2A1P68400 391 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-213ENST00000554600 RASGEF1BQ0VAM2 473 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 MAPK11Q15759 364 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 SYT14P1Q58G82 188 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 ZNF311Q5JNZ3 666 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 LRIF1Q5T3J3 769 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 GCNT6Q5T4J0 391 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 ANKRD34AQ69YU3 496 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 ZNF550Q7Z398 422 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 TUSC5Q8IXB3 177 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 ZNF440Q8IYI8 595 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 CADM2Q8N3J6 435 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 NFKBIDQ8NI38 313 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 RNF128Q8TEB7 428 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 SLC25A43Q8WUT9 341 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-213ENST00000554600 ZHX1-C8orf76Q96EF9 292 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 DACH2Q96NX9 599 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 TMEM120AQ9BXJ8 343 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 OR11A1Q9GZK7 315 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 ARMC7Q9H6L4 198 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 MED4Q9NPJ6 270 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 RASSF1Q9NS23 344 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 FGFR1OP2Q9NVK5 253 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 RLIMQ9NVW2 624 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 ELOVL5Q9NYP7 299 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 SLC25A37Q9NYZ2 338 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 LEF1Q9UJU2 399 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-213ENST00000554600 ZNF443Q9Y2A4 671 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-213ENST00000554600 NDUFAF1Q9Y375 327 aa9.52□□□□□ -0.89
SHMT2-213ENST00000554600 PRRC2AP48634 2157 aaKnown RBP9.51□□□□□ -0.89
SHMT2-213ENST00000554600 MAP1AP78559 2803 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-213ENST00000554600 TMED7-TICAM2A0A0A6YYA0 188 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 A0A1W2PP18 115 aa9.51□□□□□ -0.89
SHMT2-213ENST00000554600 ETV2O00321 342 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-213ENST00000554600 ATP8B1O43520 1251 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms