RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 MAPK14Q16539 360 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 NDUFAF6Q330K2 333 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 METTL21CQ5VZV1 264 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 PAMR1Q6UXH9 720 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 FCRLAQ7L513 359 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 OLIG3Q7RTU3 272 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 CMIPQ8IY22 773 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 FAM71CQ8NEG0 241 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 ATP6V1C2Q8NEY4 427 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 OR9I1Q8NGQ6 314 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 RNF128Q8TEB7 428 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 SLC25A43Q8WUT9 341 aaPredicted RBP7.79□□□□□ -1.16
ACTN1-213ENST00000554508 C10orf82Q8WW14 230 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 ROBO4Q8WZ75 1007 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 ITCHQ96J02 903 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 ALPK1Q96QP1 1244 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 MED18Q9BUE0 208 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 KLHL4Q9C0H6 718 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 OR10A4Q9H209 315 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 LIME1Q9H400 295 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 COQ10BQ9H8M1 238 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 EXOSC3Q9NQT5 275 aaKnown RBP7.79□□□□□ -1.16
ACTN1-213ENST00000554508 KLHL28Q9NXS3 571 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 CCDC167Q9P0B6 97 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 PLEKHA6Q9Y2H5 1048 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 SPIN1Q9Y657 262 aaPredicted RBP7.79□□□□□ -1.16
ACTN1-213ENST00000554508 ZNF469Q96JG9 3925 aaPredicted RBP7.79□□□□□ -1.16
ACTN1-213ENST00000554508 ROS1P08922 2347 aa7.79□□□□□ -1.16
ACTN1-213ENST00000554508 CELSR1Q9NYQ6 3014 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 CENPVL1A0A0U1RR11 272 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 A0A1W2PNR3 127 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 FAM234BA2RU67 622 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 NR5A2O00482 541 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 ATE1O95260 518 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 DBIP07108 87 aaKnown RBP7.78□□□□□ -1.16
ACTN1-213ENST00000554508 YES1P07947 543 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 NR2F1P10589 423 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 IL7RP16871 459 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 ENPP1P22413 925 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 CDKN2CP42773 168 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 HTR3AP46098 478 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 MRPL19P49406 292 aaKnown RBP7.78□□□□□ -1.16
ACTN1-213ENST00000554508 CLK1P49759 484 aaKnown RBP7.78□□□□□ -1.16
ACTN1-213ENST00000554508 ATP4BP51164 291 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 CSNK2A1P68400 391 aaPredicted RBP7.78□□□□□ -1.16
ACTN1-213ENST00000554508 MERTKQ12866 999 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 KEAP1Q14145 624 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 SYPL1Q16563 259 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 EXOC3L2Q2M3D2 409 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 AGKQ53H12 422 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 TMPPEQ6ZT21 453 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 PLEKHM3Q6ZWE6 761 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 GRINAQ7Z429 371 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 ZNF563Q8TA94 476 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 VPS33AQ96AX1 596 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 ZNF524Q96C55 264 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 ZG16BQ96DA0 208 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 HDHD5Q9BXW7 423 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 SRXN1Q9BYN0 137 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 SLC38A1Q9H2H9 487 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 THUMPD1Q9NXG2 353 aaKnown RBP7.78□□□□□ -1.16
ACTN1-213ENST00000554508 CALML5Q9NZT1 146 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 KLHL9Q9P2J3 617 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 KLHL13Q9P2N7 655 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 GPR52Q9Y2T5 361 aa7.78□□□□□ -1.16
ACTN1-213ENST00000554508 HEATR1Q9H583 2144 aaKnown RBP7.78□□□□□ -1.16
ACTN1-213ENST00000554508 TMEM247A6NEH6 219 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 AGAP5A6NIR3 686 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 DEFB108AA8MXU0 73 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 SULT2B1O00204 365 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 SNX3O60493 162 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 SHOX2O60902 331 aaPredicted RBP7.77□□□□□ -1.17
ACTN1-213ENST00000554508 C1QCP02747 245 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 CHRM4P08173 479 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 UQCRBP14927 111 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 PSMB1P20618 241 aaKnown RBP7.77□□□□□ -1.17
ACTN1-213ENST00000554508 RPS4Y1P22090 263 aaKnown RBP7.77□□□□□ -1.17
ACTN1-213ENST00000554508 CCKARP32238 428 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 RYKP34925 604 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 MAP2K6P52564 334 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 RASGEF1BQ0VAM2 473 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 POU4F3Q15319 338 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 ZSWIM7Q19AV6 140 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 DEFB113Q30KQ7 82 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 SYT14P1Q58G82 188 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 COX20Q5RI15 118 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 ANKRD34AQ69YU3 496 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 BLOC1S3Q6QNY0 202 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 STAC2Q6ZMT1 411 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 ZNF550Q7Z398 422 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 TUSC5Q8IXB3 177 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 PEX5LQ8IYB4 626 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 ZNF440Q8IYI8 595 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 ANKFN1Q8N957 763 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 STEAP2Q8NFT2 490 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 ABHD3Q8WU67 409 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 WDR60Q8WVS4 1066 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 OR5B2Q96R09 309 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 CCT8L2Q96SF2 557 aa7.77□□□□□ -1.17
ACTN1-213ENST00000554508 USB1Q9BQ65 265 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms