RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 SUMO3P55854 103 aaPredicted RBP10.5□□□□□ -0.73
SRP54-203ENST00000553544 TOMM34Q15785 309 aaPredicted RBP10.5□□□□□ -0.73
SRP54-203ENST00000553544 GTF2IRD2BQ6EKJ0 949 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 ESPNLQ6ZVH7 1005 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 MAVSQ7Z434 540 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 GTF2IRD2Q86UP8 949 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 OR10D3Q8NH80 312 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 PIWIL2Q8TC59 973 aaKnown RBP10.5□□□□□ -0.73
SRP54-203ENST00000553544 GPR119Q8TDV5 335 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 HSD17B8Q92506 261 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 ARL8AQ96BM9 186 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 ZNF350Q9GZX5 532 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 SAP130Q9H0E3 1048 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 MED4Q9NPJ6 270 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 INTS9Q9NV88 658 aaKnown RBP10.5□□□□□ -0.73
SRP54-203ENST00000553544 EXD2Q9NVH0 621 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 PAQR5Q9NXK6 330 aaPredicted RBP10.5□□□□□ -0.73
SRP54-203ENST00000553544 LPAR3Q9UBY5 353 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 MARCOQ9UEW3 520 aaPredicted RBP10.5□□□□□ -0.73
SRP54-203ENST00000553544 CLEC4AQ9UMR7 237 aa10.5□□□□□ -0.73
SRP54-203ENST00000553544 MAGED1Q9Y5V3 778 aaPredicted RBP10.5□□□□□ -0.73
SRP54-203ENST00000553544 GOLGA8QA0A0J9YX86 632 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 CENPVL1A0A0U1RR11 272 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 PRAMEF27A3QJZ7 478 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 GOLGA8OA6NCC3 632 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 SERINC4A6NH21 518 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 GOLGA8NF8WBI6 632 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 ZNF264O43296 627 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 ATP8B1O43520 1251 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 SSX4O60224 188 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 EIF4E2O60573 245 aaKnown RBP10.49□□□□□ -0.73
SRP54-203ENST00000553544 SS18L1O75177 396 aaPredicted RBP10.49□□□□□ -0.73
SRP54-203ENST00000553544 UGT2B17O75795 530 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 AGR2O95994 175 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 PGRP06401 933 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 THBS1P07996 1170 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 OR12D1P0DN82 309 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 KITP10721 976 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 ELK4P28324 431 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 SHC1P29353 583 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 RNF144AP50876 292 aaPredicted RBP10.49□□□□□ -0.73
SRP54-203ENST00000553544 CASP9P55211 416 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 NME5P56597 212 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 FUT5Q11128 374 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 FAPQ12884 760 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 FOXF1Q12946 379 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 GPR68Q15743 365 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 NDUFAF6Q330K2 333 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 ZNF672Q499Z4 452 aaPredicted RBP10.49□□□□□ -0.73
SRP54-203ENST00000553544 SLC9B1Q4ZJI4 515 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 SLC25A53Q5H9E4 307 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 NCMAPQ5T1S8 102 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 PDZK1Q5T2W1 519 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 C6orf52Q5T4I8 152 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 TYW3Q6IPR3 259 aaKnown RBP10.49□□□□□ -0.73
SRP54-203ENST00000553544 OLIG3Q7RTU3 272 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 TOR1AIP2Q8NFQ8 470 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 OR5W2Q8NH69 310 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 OR2V1Q8NHB1 315 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 OIT3Q8WWZ8 545 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 ZNF75CPQ92670 426 aaPredicted RBP10.49□□□□□ -0.73
SRP54-203ENST00000553544 S100PBPQ96BU1 408 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 C7orf26Q96N11 449 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 TNFRSF13CQ96RJ3 184 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 C19orf24Q9BVV8 132 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 ALG2Q9H553 416 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 TMEM160Q9NX00 188 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 MKLN1Q9UL63 735 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 MCTS1Q9ULC4 181 aaKnown RBP10.49□□□□□ -0.73
SRP54-203ENST00000553544 GPC6Q9Y625 555 aaPredicted RBP10.49□□□□□ -0.73
SRP54-203ENST00000553544 FREM1Q5H8C1 2179 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 ALPK2Q86TB3 2170 aa10.49□□□□□ -0.73
SRP54-203ENST00000553544 PRR14LQ5THK1 2151 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 CCDC154A6NI56 674 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 C9JVG2 144 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 GTPBP1O00178 669 aaKnown RBP10.48□□□□□ -0.73
SRP54-203ENST00000553544 TNFSF11O14788 317 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 CXCL13O43927 109 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 KIAA0513O60268 411 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 NDUFS7O75251 213 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 SYNGR4O95473 234 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 OPN1LWP04000 364 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 UBL4AP11441 157 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 PRKCAP17252 672 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 CDKN2CP42773 168 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 DSCR9P59020 149 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 LRRC74AQ0VAA2 488 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 SKP2Q13309 424 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 MAPK14Q16539 360 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 PGGHGQ32M88 737 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 PDCD4Q53EL6 469 aaKnown RBP10.48□□□□□ -0.73
SRP54-203ENST00000553544 TTMPQ5BVD1 217 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 TNFAIP8L2Q6P589 184 aaPredicted RBP10.48□□□□□ -0.73
SRP54-203ENST00000553544 C16orf62Q7Z3J2 963 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 LILRA2Q8N149 483 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 GLB1L3Q8NCI6 653 aaPredicted RBP10.48□□□□□ -0.73
SRP54-203ENST00000553544 FAM71CQ8NEG0 241 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 FBXO27Q8NI29 283 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 XAGE5Q8WWM1 108 aa10.48□□□□□ -0.73
SRP54-203ENST00000553544 OSTF1Q92882 214 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms