RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 CARD18P57730 90 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 ACSM2AQ08AH3 577 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 ZNF763Q0D2J5 394 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 CD226Q15762 336 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 STK11Q15831 433 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 GLE1Q53GS7 698 aaKnown RBP6.39□□□□□ -1.39
ATXN3-219ENST00000553488 SPIN4Q56A73 249 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 TIMM23BQ5SRD1 257 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 PDSS1Q5T2R2 415 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 ACSM2BQ68CK6 577 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 FAM71E1Q6IPT2 247 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 CEP112Q8N8E3 955 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 CDYL2Q8N8U2 506 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 OR4C3Q8NH37 302 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 FAM110BQ8TC76 370 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 FBXO25Q8TCJ0 367 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 ZNF524Q96C55 264 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 ELP4Q96EB1 424 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 GIMAP5Q96F15 307 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 SH3YL1Q96HL8 342 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-219ENST00000553488 RADILQ96JH8 1075 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 C20orf173Q96LM9 149 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 AMDHD1Q96NU7 426 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 BBS4Q96RK4 519 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 VPS11Q9H270 941 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 EML4Q9HC35 981 aaKnown RBP6.39□□□□□ -1.39
ATXN3-219ENST00000553488 NMRK1Q9NWW6 199 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 TAS2R7Q9NYW3 318 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 FBXL7Q9UJT9 491 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 MRTO4Q9UKD2 239 aaKnown RBP6.39□□□□□ -1.39
ATXN3-219ENST00000553488 GRID1Q9ULK0 1009 aa6.39□□□□□ -1.39
ATXN3-219ENST00000553488 IGHV3-15A0A0B4J1V0 119 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 IGHV4-61A0A0C4DH41 118 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 A0A1W2PQD3 144 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 OR5H1A6NKK0 313 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 TTC36A6NLP5 189 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 KIF2AO00139 706 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-219ENST00000553488 SMAD9O15198 467 aaKnown RBP6.38□□□□□ -1.39
ATXN3-219ENST00000553488 RGS14O43566 566 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 SMIM24O75264 130 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 PRKD3O94806 890 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 KRT6AP02538 564 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 KRT6BP04259 564 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 ACP2P11117 423 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 ITGA2P17301 1181 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 GGT1P19440 569 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 ENPP1P22413 925 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 CD40P25942 277 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 NTSP30990 170 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 GABRA3P34903 492 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 HSD17B3P37058 310 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 EIF1P41567 113 aaKnown RBP6.38□□□□□ -1.39
ATXN3-219ENST00000553488 LIMS1P48059 325 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 KRT6CP48668 564 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 EFNA4P52798 201 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 ZNF117Q03924 483 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 RASA2Q15283 850 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 RAB35Q15286 201 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 TRADDQ15628 312 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 ZNHIT3Q15649 155 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-219ENST00000553488 ZNF544Q6NX49 715 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 SSX8Q7RTT4 187 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 P2RY8Q86VZ1 359 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 RFLNBQ8N5W9 214 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 ZNF433Q8N7K0 673 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-219ENST00000553488 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-219ENST00000553488 LINC01356Q8N9X3 169 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 ZFP90Q8TF47 636 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 ZNF75CPQ92670 426 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-219ENST00000553488 TMEM237Q96Q45 408 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 ZNF300Q96RE9 604 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-219ENST00000553488 ZNF382Q96SR6 550 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 SOX7Q9BT81 388 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 KRTAP4-7Q9BYR0 210 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 MRPL46Q9H2W6 279 aaKnown RBP6.38□□□□□ -1.39
ATXN3-219ENST00000553488 CDIP1Q9H305 208 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 C3orf14Q9HBI5 128 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 HHATLQ9HCP6 504 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 MYNNQ9NPC7 610 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 EQTNQ9NQ60 294 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 SLC25A15Q9Y619 301 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 WNK2Q9Y3S1 2297 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 VWFP04275 2813 aa6.38□□□□□ -1.39
ATXN3-219ENST00000553488 ZNF724A8MTY0 619 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 NDUFS8O00217 210 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 TCF21O43680 179 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 CYTIPO60759 359 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 ULK1O75385 1050 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 RAD51DO75771 328 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 KCNK2O95069 426 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 H6PDO95479 791 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 ANXA4P09525 319 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-219ENST00000553488 DHRS4L1P0CG22 281 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 HNF1AP20823 631 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 PTAFRP25105 342 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 ECI1P42126 302 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 NR4A2P43354 598 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 PLTPP55058 493 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 GGTLC2Q14390 218 aa6.37□□□□□ -1.39
ATXN3-219ENST00000553488 SQLEQ14534 574 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms