RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 TFAP2EQ6VUC0 442 aa14.14□□□□□ -0.15
CDK4-215ENST00000553237 DNAJC14Q6Y2X3 702 aaPredicted RBP14.14□□□□□ -0.15
CDK4-215ENST00000553237 LSRQ86X29 649 aaPredicted RBP14.14□□□□□ -0.15
CDK4-215ENST00000553237 CXorf67Q86X51 503 aaPredicted RBP14.14□□□□□ -0.15
CDK4-215ENST00000553237 SLC43A2Q8N370 569 aa14.14□□□□□ -0.15
CDK4-215ENST00000553237 FAM71CQ8NEG0 241 aa14.14□□□□□ -0.15
CDK4-215ENST00000553237 WFDC11Q8NEX6 87 aa14.14□□□□□ -0.15
CDK4-215ENST00000553237 MAGEB18Q96M61 343 aa14.14□□□□□ -0.15
CDK4-215ENST00000553237 BEX4Q9NWD9 120 aaPredicted RBP14.14□□□□□ -0.15
CDK4-215ENST00000553237 GPR52Q9Y2T5 361 aa14.14□□□□□ -0.15
CDK4-215ENST00000553237 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.13□□□□□ -0.15
CDK4-215ENST00000553237 KLF4O43474 513 aa14.13□□□□□ -0.15
CDK4-215ENST00000553237 SLC22A3O75751 556 aa14.13□□□□□ -0.15
CDK4-215ENST00000553237 CCNA2P20248 432 aa14.13□□□□□ -0.15
CDK4-215ENST00000553237 IDH3AP50213 366 aa14.13□□□□□ -0.15
CDK4-215ENST00000553237 PLAURQ03405 335 aa14.13□□□□□ -0.15
CDK4-215ENST00000553237 RASGEF1BQ0VAM2 473 aa14.13□□□□□ -0.15
CDK4-215ENST00000553237 GSTA3Q16772 222 aa14.13□□□□□ -0.15
CDK4-215ENST00000553237 ARFGAP2Q8N6H7 521 aa14.13□□□□□ -0.15
CDK4-215ENST00000553237 GLB1L3Q8NCI6 653 aaPredicted RBP14.13□□□□□ -0.15
CDK4-215ENST00000553237 CNOT9Q92600 299 aaKnown RBP14.13□□□□□ -0.15
CDK4-215ENST00000553237 TRNT1Q96Q11 434 aaKnown RBP14.13□□□□□ -0.15
CDK4-215ENST00000553237 SLC38A1Q9H2H9 487 aa14.13□□□□□ -0.15
CDK4-215ENST00000553237 CTPS2Q9NRF8 586 aa14.13□□□□□ -0.15
CDK4-215ENST00000553237 SLC6A13Q9NSD5 602 aa14.13□□□□□ -0.15
CDK4-215ENST00000553237 KLHL9Q9P2J3 617 aa14.13□□□□□ -0.15
CDK4-215ENST00000553237 ING1Q9UK53 422 aaPredicted RBP14.13□□□□□ -0.15
CDK4-215ENST00000553237 LIPT1Q9Y234 373 aa14.13□□□□□ -0.15
CDK4-215ENST00000553237 SULT2B1O00204 365 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 RFXANKO14593 260 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 SMAD9O15198 467 aaKnown RBP14.12□□□□□ -0.15
CDK4-215ENST00000553237 ADAM11O75078 769 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 GCM2O75603 506 aaPredicted RBP14.12□□□□□ -0.15
CDK4-215ENST00000553237 PLAUP00749 431 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 ADAP00813 363 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 FESP07332 822 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 NR2F1P10589 423 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 PSMB1P20618 241 aaKnown RBP14.12□□□□□ -0.15
CDK4-215ENST00000553237 HOXC12P31275 282 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 IDH2P48735 452 aaKnown RBP14.12□□□□□ -0.15
CDK4-215ENST00000553237 DIO1P49895 249 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 ANXA11P50995 505 aaKnown RBP14.12□□□□□ -0.15
CDK4-215ENST00000553237 AQP5P55064 265 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 NKX6-1P78426 367 aaPredicted RBP14.12□□□□□ -0.15
CDK4-215ENST00000553237 SYT14P1Q58G82 188 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 BEX5Q5H9J7 111 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 AP1ARQ63HQ0 302 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 LRRC74BQ6ZQY2 392 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 TMPPEQ6ZT21 453 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.12□□□□□ -0.15
CDK4-215ENST00000553237 GABRG1Q8N1C3 465 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 OIT3Q8WWZ8 545 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 S100PBPQ96BU1 408 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 PLPPR2Q96GM1 343 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 ZNF300Q96RE9 604 aaPredicted RBP14.12□□□□□ -0.15
CDK4-215ENST00000553237 PSD2Q9BQI7 771 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 EBF4Q9BQW3 602 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 CCDC106Q9BWC9 280 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 GP6Q9HCN6 339 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 TCF7L2Q9NQB0 619 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 SDR39U1Q9NRG7 319 aaPredicted RBP14.12□□□□□ -0.15
CDK4-215ENST00000553237 ZIM2Q9NZV7 527 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 PRR14LQ5THK1 2151 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 ROS1P08922 2347 aa14.12□□□□□ -0.15
CDK4-215ENST00000553237 AGAP5A6NIR3 686 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 ZNF814B7Z6K7 855 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 AP3D1O14617 1153 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 POLR3GO15318 223 aaPredicted RBP14.11□□□□□ -0.15
CDK4-215ENST00000553237 CYTIPO60759 359 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 SMPD2O60906 423 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 KRT75O95678 551 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 IL6P05231 212 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 FPR1P21462 350 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 IL32P24001 234 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 APOBEC1P41238 236 aaKnown RBP14.11□□□□□ -0.15
CDK4-215ENST00000553237 LRRC74AQ0VAA2 488 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 GTDC1Q4AE62 458 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 SFRP5Q5T4F7 317 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 MIER2Q8N344 545 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 STEAP2Q8NFT2 490 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 OR9I1Q8NGQ6 314 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 PIGTQ969N2 578 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 CCL19Q99731 98 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 OR11A1Q9GZK7 315 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 GSX1Q9H4S2 264 aaPredicted RBP14.11□□□□□ -0.15
CDK4-215ENST00000553237 MTHFD2LQ9H903 347 aaPredicted RBP14.11□□□□□ -0.15
CDK4-215ENST00000553237 BCO1Q9HAY6 547 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 EXOSC3Q9NQT5 275 aaKnown RBP14.11□□□□□ -0.15
CDK4-215ENST00000553237 CHRNA9Q9UGM1 479 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 PRSS50Q9UI38 385 aa14.11□□□□□ -0.15
CDK4-215ENST00000553237 ZNF469Q96JG9 3925 aaPredicted RBP14.1□□□□□ -0.15
CDK4-215ENST00000553237 ANP32DO95626 131 aa14.1□□□□□ -0.15
CDK4-215ENST00000553237 ETFAP13804 333 aa14.1□□□□□ -0.15
CDK4-215ENST00000553237 IL7RP16871 459 aa14.1□□□□□ -0.15
CDK4-215ENST00000553237 EDNRAP25101 427 aa14.1□□□□□ -0.15
CDK4-215ENST00000553237 CRATP43155 626 aa14.1□□□□□ -0.15
CDK4-215ENST00000553237 POLR2JP52435 117 aaKnown RBP14.1□□□□□ -0.15
CDK4-215ENST00000553237 CSNK2A1P68400 391 aaPredicted RBP14.1□□□□□ -0.15
CDK4-215ENST00000553237 TXNL4AP83876 142 aaKnown RBP14.1□□□□□ -0.15
CDK4-215ENST00000553237 ZNF704Q6ZNC4 412 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms