RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 RAB3BP20337 219 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 ITGB8P26012 769 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 DDX6P26196 483 aaKnown RBP eCLIP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 MPIP34949 423 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 P2RY2P41231 377 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 RPS11P62280 158 aaKnown RBP eCLIP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 PITPNAQ00169 270 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 GAB4Q2WGN9 574 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 TP53I3Q53FA7 332 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 ADAMTSL4Q6UY14 1074 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 KANSL1Q7Z3B3 1105 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 CDH24Q86UP0 819 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 SLC51BQ86UW2 128 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 GPALPP1Q8IXQ4 340 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 CMIPQ8IY22 773 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 MS4A15Q8N5U1 240 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 TEX19Q8NA77 164 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 TMIEQ8NEW7 156 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 OR2L5Q8NG80 312 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 OR11G2Q8NGC1 345 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 OR2T35Q8NGX2 323 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 OR2T4Q8NH00 348 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 ZNRF4Q8WWF5 429 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 SMPDL3BQ92485 455 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 PIGKQ92643 395 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 COL26A1Q96A83 441 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 DACT3Q96B18 629 aaPredicted RBP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 NXPE2Q96DL1 559 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 HS6ST2Q96MM7 605 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 DERL3Q96Q80 235 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 CD180Q99467 661 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 DDOQ99489 341 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 GFI1Q99684 422 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 NDC1Q9BTX1 674 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 IFT27Q9BW83 186 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 RBCK1Q9BYM8 510 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 ACTR6Q9GZN1 396 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 TMEM168Q9H0V1 697 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 C12orf10Q9HB07 376 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 KRCC1Q9NPI7 259 aaPredicted RBP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 MEPEQ9NQ76 525 aaPredicted RBP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 CMC2Q9NRP2 79 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 ZNF275Q9NSD4 429 aaPredicted RBP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 WSB2Q9NYS7 404 aaPredicted RBP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 KLF15Q9UIH9 416 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 SIGLEC7Q9Y286 467 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 AK6Q9Y3D8 172 aaKnown RBP5.01□□□□□ -1.61
LIMA1-212ENST00000552491 WDR45Q9Y484 360 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 INSL6Q9Y581 213 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 NPTNQ9Y639 398 aa5.01□□□□□ -1.61
LIMA1-212ENST00000552491 SSNA1O43805 119 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 RNGTTO60942 597 aaKnown RBP5□□□□□ -1.61
LIMA1-212ENST00000552491 RGS11O94810 467 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 SLC35G4P0C7Q5 338 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 RRASP10301 218 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 ADH5P11766 374 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 CEBPBP17676 345 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 POU3F2P20265 443 aaPredicted RBP5□□□□□ -1.61
LIMA1-212ENST00000552491 NDUFS1P28331 727 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 GDNFP39905 211 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 VIPR2P41587 438 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 VEGFCP49767 419 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 RAB28P51157 221 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 TAS2R43P59537 309 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 BTN3A2P78410 334 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 HTRA3P83110 453 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 TAGLNQ01995 201 aaKnown RBP5□□□□□ -1.61
LIMA1-212ENST00000552491 ID2Q02363 134 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 RPL6Q02878 288 aaKnown RBP5□□□□□ -1.61
LIMA1-212ENST00000552491 SNTB2Q13425 540 aaKnown RBP5□□□□□ -1.61
LIMA1-212ENST00000552491 OR1Q1Q15612 314 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 ZSWIM7Q19AV6 140 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 MRPL2Q5T653 305 aaKnown RBP5□□□□□ -1.61
LIMA1-212ENST00000552491 SLC22A10Q63ZE4 541 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 RTL4Q6ZR62 310 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 GRASPQ7Z6J2 395 aaPredicted RBP5□□□□□ -1.61
LIMA1-212ENST00000552491 FGD2Q7Z6J4 655 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 ASPGQ86U10 573 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 ETFBKMTQ8IXQ9 262 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 CMTM4Q8IZR5 234 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 FTMTQ8N4E7 242 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 GALNT11Q8NCW6 608 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 OR52E1Q8NGJ3 308 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 OR51L1Q8NGJ5 315 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 OR51A7Q8NH64 312 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 OR56B4Q8NH76 319 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 LGALS14Q8TCE9 139 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 CXorf40AQ8TE69 158 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 HMGB4Q8WW32 186 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 TMEM239Q8WW34 195 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 OR8D1Q8WZ84 308 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 SDF2Q99470 211 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 SARGQ9BW04 601 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 CHIAQ9BZP6 476 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 ZNF436Q9C0F3 470 aaPredicted RBP5□□□□□ -1.61
LIMA1-212ENST00000552491 C20orf85Q9H1P6 137 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 ZCCHC4Q9H5U6 513 aa5□□□□□ -1.61
LIMA1-212ENST00000552491 MTHFD2LQ9H903 347 aaPredicted RBP5□□□□□ -1.61
LIMA1-212ENST00000552491 MRPS30Q9NP92 439 aaKnown RBP5□□□□□ -1.61
LIMA1-212ENST00000552491 BRD7Q9NPI1 651 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms