RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 RAB23Q9ULC3 237 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 MYO6Q9UM54 1294 aa5.54□□□□□ -1.52
VPS29-210ENST00000552130 PRG3Q9Y2Y8 225 aaPredicted RBP5.54□□□□□ -1.52
VPS29-210ENST00000552130 PTPRCP08575 1304 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 RAD50Q92878 1312 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 CDHR2Q9BYE9 1310 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 FGD5Q6ZNL6 1462 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 TRBV9A0A0B4J1U6 114 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 GOLGA6L9A6NEM1 432 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 OR5K3A6NET4 321 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 GOLGA6L10A6NI86 522 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 UNC119BA6NIH7 251 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 KRTAP29-1A8MX34 341 aaPredicted RBP5.53□□□□□ -1.52
VPS29-210ENST00000552130 G3V4G9 280 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 J3KR12 359 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 SIRPB1O00241 398 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 TFECO14948 347 aaPredicted RBP5.53□□□□□ -1.52
VPS29-210ENST00000552130 AQP9O43315 295 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 B4GAT1O43505 415 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 PSTPIP1O43586 416 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 EFNA2O43921 213 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 NDUFS7O75251 213 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 RFPL2O75678 378 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 ZMPSTE24O75844 475 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 SC5DO75845 299 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 CIAO1O76071 339 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 CA1P00915 261 aaPredicted RBP5.53□□□□□ -1.52
VPS29-210ENST00000552130 HLA-HP01893 362 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 PRKCGP05129 697 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 ZNF7P17097 686 aaPredicted RBP5.53□□□□□ -1.52
VPS29-210ENST00000552130 CFL1P23528 166 aaKnown RBP5.53□□□□□ -1.52
VPS29-210ENST00000552130 HLA-DMAP28067 261 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 CSKP41240 450 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 FOLR3P41439 243 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 KIR3DL2P43630 455 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 GNPDA1P46926 289 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 PSMD7P51665 324 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 SEC61BP60468 96 aaKnown RBP5.53□□□□□ -1.52
VPS29-210ENST00000552130 ATP6V0D1P61421 351 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 RPS6P62753 249 aaKnown RBP5.53□□□□□ -1.52
VPS29-210ENST00000552130 RBBP4Q09028 425 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 TSPAN31Q12999 210 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 CTTNQ14247 550 aaKnown RBP5.53□□□□□ -1.52
VPS29-210ENST00000552130 SLC17A1Q14916 467 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 ALX1Q15699 326 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 EZH2Q15910 746 aaKnown RBP5.53□□□□□ -1.52
VPS29-210ENST00000552130 ZNF77Q15935 545 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 SEL1L2Q5TEA6 688 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 PLPP4Q5VZY2 271 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 PRSS57Q6UWY2 283 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 ZNF621Q6ZSS3 439 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 ITIH5Q86UX2 942 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 FUNDC1Q8IVP5 155 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 SLC35F2Q8IXU6 374 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 LINC00518Q8N0U6 118 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 ELMOD1Q8N336 334 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 FAM89BQ8N5H3 189 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 LMNTD1Q8N9Z9 388 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 RELL2Q8NC24 303 aaPredicted RBP5.53□□□□□ -1.52
VPS29-210ENST00000552130 OR2AP1Q8NGE2 309 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 OR10A7Q8NGE5 316 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 OR1B1Q8NGR6 318 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 CPNE4Q96A23 557 aaPredicted RBP5.53□□□□□ -1.52
VPS29-210ENST00000552130 ISOC2Q96AB3 205 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 RAD51AP1Q96B01 352 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 BIRC7Q96CA5 298 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 CELF6Q96J87 481 aaKnown RBP5.53□□□□□ -1.52
VPS29-210ENST00000552130 GFM1Q96RP9 751 aaKnown RBP5.53□□□□□ -1.52
VPS29-210ENST00000552130 TRAF4Q9BUZ4 470 aaPredicted RBP5.53□□□□□ -1.52
VPS29-210ENST00000552130 CPVLQ9H3G5 476 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 IKZF5Q9H5V7 419 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 ALG9Q9H6U8 611 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 SIRT7Q9NRC8 400 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 ADARB2Q9NS39 739 aaKnown RBP5.53□□□□□ -1.52
VPS29-210ENST00000552130 MRPL39Q9NYK5 338 aaKnown RBP5.53□□□□□ -1.52
VPS29-210ENST00000552130 SIGLEC8Q9NYZ4 499 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 CD274Q9NZQ7 290 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 STUB1Q9UNE7 303 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 CDH10Q9Y6N8 788 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 USP47Q96K76 1375 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 JCADQ9P266 1359 aa5.53□□□□□ -1.52
VPS29-210ENST00000552130 F5H6K3 240 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 BLOC1S5-TXNDC5H3BN57 136 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 CCSO14618 274 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 MSH4O15457 936 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 PCDH7O60245 1069 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 DEXIO95424 95 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 LDOC1O95751 146 aaPredicted RBP5.52□□□□□ -1.53
VPS29-210ENST00000552130 LATS1O95835 1130 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 HOXB2P14652 356 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 CBLP22681 906 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 MAGEA6P43360 314 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 BDKRB1P46663 353 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 BRCC3P46736 316 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 CX3CR1P49238 355 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 GNG10P50151 68 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 PKNOX1P55347 436 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 RAG2P55895 527 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 NUP107P57740 925 aa5.52□□□□□ -1.53
VPS29-210ENST00000552130 NTHL1P78549 312 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms