RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 MAPK14Q16539 360 aa13.75□□□□□ -0.21
BRF1-220ENST00000552127 ZNF239Q16600 458 aaKnown RBP13.75□□□□□ -0.21
BRF1-220ENST00000552127 GSTA3Q16772 222 aa13.75□□□□□ -0.21
BRF1-220ENST00000552127 GPAT3Q53EU6 434 aa13.75□□□□□ -0.21
BRF1-220ENST00000552127 FRRS1Q6ZNA5 592 aa13.75□□□□□ -0.21
BRF1-220ENST00000552127 EIF3MQ7L2H7 374 aaKnown RBP13.75□□□□□ -0.21
BRF1-220ENST00000552127 RNF130Q86XS8 419 aa13.75□□□□□ -0.21
BRF1-220ENST00000552127 ZNF619Q8N2I2 560 aa13.75□□□□□ -0.21
BRF1-220ENST00000552127 ZNF610Q8N9Z0 462 aa13.75□□□□□ -0.21
BRF1-220ENST00000552127 FAM71CQ8NEG0 241 aa13.75□□□□□ -0.21
BRF1-220ENST00000552127 ZFP90Q8TF47 636 aa13.75□□□□□ -0.21
BRF1-220ENST00000552127 ZNF75CPQ92670 426 aaPredicted RBP13.75□□□□□ -0.21
BRF1-220ENST00000552127 OSTF1Q92882 214 aa13.75□□□□□ -0.21
BRF1-220ENST00000552127 CPNE4Q96A23 557 aaPredicted RBP13.75□□□□□ -0.21
BRF1-220ENST00000552127 ZNF524Q96C55 264 aa13.75□□□□□ -0.21
BRF1-220ENST00000552127 THUMPD3Q9BV44 507 aaKnown RBP13.75□□□□□ -0.21
BRF1-220ENST00000552127 SAP130Q9H0E3 1048 aa13.75□□□□□ -0.21
BRF1-220ENST00000552127 COQ10BQ9H8M1 238 aa13.75□□□□□ -0.21
BRF1-220ENST00000552127 GLRX2Q9NS18 164 aa13.75□□□□□ -0.21
BRF1-220ENST00000552127 FREM1Q5H8C1 2179 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 PRAMEF27A3QJZ7 478 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 DEFB108AA8MXU0 73 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 SLC22A3O75751 556 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 IL6P05231 212 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 GSNP06396 782 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 UBTFL6P0CB48 400 aaPredicted RBP13.74□□□□□ -0.21
BRF1-220ENST00000552127 PAX1P15863 534 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 UGT2B10P36537 528 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 KCNJ5P48544 419 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 ANXA11P50995 505 aaKnown RBP13.74□□□□□ -0.21
BRF1-220ENST00000552127 CARD18P57730 90 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 TXNL4AP83876 142 aaKnown RBP13.74□□□□□ -0.21
BRF1-220ENST00000552127 AP1ARQ63HQ0 302 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 DNAJC14Q6Y2X3 702 aaPredicted RBP13.74□□□□□ -0.21
BRF1-220ENST00000552127 ZNF621Q6ZSS3 439 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 RNF128Q8TEB7 428 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 ST8SIA1Q92185 356 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 PIK3IP1Q96FE7 263 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 ATP6V1G3Q96LB4 118 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 OR52B2Q96RD2 323 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 SRXN1Q9BYN0 137 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 AMBRA1Q9C0C7 1298 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 TIGARQ9NQ88 270 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 SDR39U1Q9NRG7 319 aaPredicted RBP13.74□□□□□ -0.21
BRF1-220ENST00000552127 ZIM2Q9NZV7 527 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 SLC35A3Q9Y2D2 325 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 USH1CQ9Y6N9 552 aa13.74□□□□□ -0.21
BRF1-220ENST00000552127 RFXANKO14593 260 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 UBDO15205 165 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 SPRY1O43609 319 aaPredicted RBP13.73□□□□□ -0.21
BRF1-220ENST00000552127 H6PDO95479 791 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 PABPC4LP0CB38 370 aaKnown RBP13.73□□□□□ -0.21
BRF1-220ENST00000552127 PGCP20142 388 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 AGTR1P30556 359 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 SLC7A1P30825 629 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 PGM1P36871 562 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 TMEM176BQ3YBM2 270 aaPredicted RBP13.73□□□□□ -0.21
BRF1-220ENST00000552127 TIGD2Q4W5G0 525 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 TTMPQ5BVD1 217 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 GTF2IRD2BQ6EKJ0 949 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 C3orf33Q6P1S2 294 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 GTF2IRD2Q86UP8 949 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 ANKFN1Q8N957 763 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 ATP6V1C2Q8NEY4 427 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 PNPT1Q8TCS8 783 aaKnown RBP13.73□□□□□ -0.21
BRF1-220ENST00000552127 IGFBPL1Q8WX77 278 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 TMEM234Q8WY98 164 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 ROBO4Q8WZ75 1007 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 REXO5Q96IC2 774 aaKnown RBP13.73□□□□□ -0.21
BRF1-220ENST00000552127 C7orf26Q96N11 449 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 WFIKKN1Q96NZ8 548 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 TRNT1Q96Q11 434 aaKnown RBP13.73□□□□□ -0.21
BRF1-220ENST00000552127 MED18Q9BUE0 208 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 PLSCR4Q9NRQ2 329 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 KLHL28Q9NXS3 571 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 LIPT1Q9Y234 373 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 TGP01266 2768 aa13.73□□□□□ -0.21
BRF1-220ENST00000552127 C16orf97H3BN30 126 aa13.72□□□□□ -0.21
BRF1-220ENST00000552127 BCAS1O75363 584 aaPredicted RBP13.72□□□□□ -0.21
BRF1-220ENST00000552127 KRT75O95678 551 aa13.72□□□□□ -0.21
BRF1-220ENST00000552127 CHRM4P08173 479 aa13.72□□□□□ -0.21
BRF1-220ENST00000552127 SESN3P58005 492 aa13.72□□□□□ -0.21
BRF1-220ENST00000552127 SRSF2Q01130 221 aaKnown RBP13.72□□□□□ -0.21
BRF1-220ENST00000552127 CHRNEQ04844 493 aa13.72□□□□□ -0.21
BRF1-220ENST00000552127 RNPS1Q15287 305 aaKnown RBP13.72□□□□□ -0.21
BRF1-220ENST00000552127 SYPL1Q16563 259 aa13.72□□□□□ -0.21
BRF1-220ENST00000552127 EXOC3L2Q2M3D2 409 aa13.72□□□□□ -0.21
BRF1-220ENST00000552127 COX20Q5RI15 118 aa13.72□□□□□ -0.21
BRF1-220ENST00000552127 EPGNQ6UW88 154 aa13.72□□□□□ -0.21
BRF1-220ENST00000552127 MSANTD1Q6ZTZ1 278 aa13.72□□□□□ -0.21
BRF1-220ENST00000552127 HMGN2P46Q86SG4 172 aa13.72□□□□□ -0.21
BRF1-220ENST00000552127 MIER2Q8N344 545 aa13.72□□□□□ -0.21
BRF1-220ENST00000552127 OR9I1Q8NGQ6 314 aa13.72□□□□□ -0.21
BRF1-220ENST00000552127 LRRC8CQ8TDW0 803 aa13.72□□□□□ -0.21
BRF1-220ENST00000552127 ABHD3Q8WU67 409 aa13.72□□□□□ -0.21
BRF1-220ENST00000552127 QRSL1Q9H0R6 528 aaKnown RBP13.72□□□□□ -0.21
BRF1-220ENST00000552127 SLC38A1Q9H2H9 487 aa13.72□□□□□ -0.21
BRF1-220ENST00000552127 EXOSC3Q9NQT5 275 aaKnown RBP13.72□□□□□ -0.21
BRF1-220ENST00000552127 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.72□□□□□ -0.21
BRF1-220ENST00000552127 SLC6A13Q9NSD5 602 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms