RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, human

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-206	ENST00000550406	RPS6KA6	Q9UK32	745 aa		11.76	□□□□□ -0.53
RAB5C-206	ENST00000550406	SLC13A4	Q9UKG4	626 aa		11.76	□□□□□ -0.53
RAB5C-206	ENST00000550406	POMP	Q9Y244	141 aa		11.76	□□□□□ -0.53
RAB5C-206	ENST00000550406	AP4B1	Q9Y6B7	739 aa		11.76	□□□□□ -0.53
RAB5C-206	ENST00000550406	TMED7-TICAM2	A0A0A6YYA0	188 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406		A0A0B4J2E0	115 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406		A0A0J9YW62	118 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406		A0A1B0GX12	115 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	TMEM72	A0PK05	275 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	KDM4E	B2RXH2	506 aa	Predicted RBP	11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	PYCARD-AS1	I3L0S3	204 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	LINC01387	J3KSC0	135 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	FMO6P	O60774	539 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	GMNN	O75496	209 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	CPN1	P15169	458 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	ZNF708	P17019	499 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	GNLY	P22749	145 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	APOBEC1	P41238	236 aa	Known RBP	11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	RAC1	P63000	192 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	BCL2A1	Q16548	175 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	CTU2	Q2VPK5	515 aa	Known RBP	11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	IFI44L	Q53G44	452 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	ENTPD8	Q5MY95	495 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	AAGAB	Q6PD74	315 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	POMZP3	Q6PJE2	187 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	YTHDF3	Q7Z739	585 aa	Known RBP	11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	ATG4D	Q86TL0	474 aa	Predicted RBP	11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	DOLPP1	Q86YN1	238 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	OR5M9	Q8NGP3	310 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	LZIC	Q8WZA0	190 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	RELT	Q969Z4	430 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	SARAF	Q96BY9	339 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	PYURF	Q96I23	114 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	ADGRG7	Q96K78	797 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	TRIM2	Q9C040	744 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	PRDM14	Q9GZV8	571 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	TMEM185B	Q9H7F4	350 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	TES	Q9UGI8	421 aa	Known RBP	11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	PRDM4	Q9UKN5	801 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	A4GNT	Q9UNA3	340 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	SAMD4A	Q9UPU9	718 aa	Known RBP	11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	SLC9A8	Q9Y2E8	581 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	TMED7	Q9Y3B3	224 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406		V9GYQ6	96 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	MED12L	Q86YW9	2145 aa		11.75	□□□□□ -0.53
RAB5C-206	ENST00000550406	CPSF4L	A6NMK7	179 aa	Known RBP	11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406		J3KTA2	159 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	FFAR1	O14842	300 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	SLC19A2	O60779	497 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	PEPD	P12955	493 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	CCNA2	P20248	432 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	ELK4	P28324	431 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	POLR2H	P52434	150 aa	Known RBP	11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	CDH12	P55289	794 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	COPZ1	P61923	177 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	VLDLR	P98155	873 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	MTX3	Q5HYI7	312 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	RTL6	Q6ICC9	239 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	LINC00114	Q6XXX2	140 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	WDR88	Q6ZMY6	472 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	ZNF605	Q86T29	641 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	CD163	Q86VB7	1156 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	LILRA2	Q8N149	483 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	ATP6V1C2	Q8NEY4	427 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	GEMIN6	Q8WXD5	167 aa	Known RBP	11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	SLC38A4	Q969I6	547 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	MCUR1	Q96AQ8	359 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	TMEM27	Q9HBJ8	222 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	ACAD8	Q9UKU7	415 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	DOCK7	Q96N67	2140 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	POLE	Q07864	2286 aa		11.74	□□□□□ -0.53
RAB5C-206	ENST00000550406	ZC3H12D	A2A288	527 aa	Known RBP	11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	BCKDK	O14874	412 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	PRSS23	O95084	383 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	TPO	P07202	933 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	UQCRB	P14927	111 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	ABO	P16442	354 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	POU3F2	P20265	443 aa	Predicted RBP	11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	SFTPD	P35247	375 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	HTR3A	P46098	478 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	YAP1	P46937	504 aa	Known RBP	11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	KCNC4	Q03721	635 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	SRY	Q05066	204 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	EGR4	Q05215	589 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	SELENBP1	Q13228	472 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	PIN1	Q13526	163 aa	Predicted RBP	11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	ZSCAN26	Q16670	478 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	TMEM176B	Q3YBM2	270 aa	Predicted RBP	11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	C1QL3	Q5VWW1	255 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	ZNF613	Q6PF04	617 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	MYO7B	Q6PIF6	2116 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	PLXDC2	Q6UX71	529 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	DEF8	Q6ZN54	512 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	FKBP9P1	Q75LS8	142 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	GDF7	Q7Z4P5	450 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	ADGRE4P	Q86SQ3	457 aa		11.73	□□□□□ -0.53
RAB5C-206	ENST00000550406	UBQLNL	Q8IYU4	475 aa		11.73	□□□□□ -0.53

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