RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 GTF2IRD2Q86UP8 949 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 MSRB3Q8IXL7 192 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 OR52P1PQ8NH57 321 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 OR5B2Q96R09 309 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 SLC39A3Q9BRY0 314 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 CCDC106Q9BWC9 280 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 FGFR1OP2Q9NVK5 253 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 CHRNA9Q9UGM1 479 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 CORO2BQ9UQ03 480 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 ZNF443Q9Y2A4 671 aaPredicted RBP15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 CSMD1Q96PZ7 3565 aa15.41■□□□□ 0.06
CHMP1A-208ENST00000550102 TRBV5-3A0A0A0MS03 114 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 A0A0G2JPF8 293 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 A0A1W2PNR3 127 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 SH3D21A4FU49 640 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 CDHR4A6H8M9 788 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 A6NNC1 897 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 HNRNPCL2B2RXH8 293 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 HNRNPCL3B7ZW38 293 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 C5orf58C9J3I9 102 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 FAAHO00519 579 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 AP3D1O14617 1153 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 HNRNPCL1O60812 293 aaKnown RBP15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 CTAG2O75638 210 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 HNRNPCL4P0DMR1 293 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 AGTR1P30556 359 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 CD79BP40259 229 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 HTR3AP46098 478 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 IDH2P48735 452 aaKnown RBP15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 RAC3P60763 192 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 LARS2Q15031 903 aaKnown RBP15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 ZSWIM7Q19AV6 140 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 GCNT6Q5T4J0 391 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 METTL21CQ5VZV1 264 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 ZNF836Q6ZNA1 936 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 FCRLAQ7L513 359 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 BBS10Q8TAM1 723 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 ABHD3Q8WU67 409 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 ROBO4Q8WZ75 1007 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 TMEM120AQ9BXJ8 343 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 GP6Q9HCN6 339 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 CTPS2Q9NRF8 586 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 ELOVL5Q9NYP7 299 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 VAPAQ9P0L0 249 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 KLHL13Q9P2N7 655 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 LEF1Q9UJU2 399 aaPredicted RBP15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 GMEB1Q9Y692 573 aa15.4■□□□□ 0.06
CHMP1A-208ENST00000550102 FREM1Q5H8C1 2179 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 CFAP73A6NFT4 308 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 ANGPT2O15123 496 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 ADAM11O75078 769 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 GOSR1O95249 250 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 NUDT7P0C024 238 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 TFPIP10646 304 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 EPXP11678 715 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 POU2F1P14859 743 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 KCNJ5P48544 419 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 ZNF474Q6S9Z5 364 aaPredicted RBP15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 DHDDSQ86SQ9 333 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 STK32CQ86UX6 486 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 VRK2Q86Y07 508 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 LURAP1LQ8IV03 231 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 SLC43A2Q8N370 569 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 LINC01560Q8TB33 94 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 MAL2Q969L2 176 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 DACH2Q96NX9 599 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 GPATCH1Q9BRR8 931 aaKnown RBP15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 TACO1Q9BSH4 297 aaKnown RBP15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 ARMC7Q9H6L4 198 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 BCL2L10Q9HD36 194 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 MRGBPQ9NV56 204 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 SLAMF8Q9P0V8 285 aa15.39■□□□□ 0.05
CHMP1A-208ENST00000550102 EVPLLA8MZ36 301 aa15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 VIMP08670 466 aaKnown RBP15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 ARAFP10398 606 aa15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 FKBP2P26885 142 aaKnown RBP15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 CCKARP32238 428 aa15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 DIO1P49895 249 aa15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 POLR2HP52434 150 aaKnown RBP15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 CSNK2A1P68400 391 aaPredicted RBP15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 EPS8Q12929 822 aa15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 DAZAP2Q15038 168 aaPredicted RBP15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 TMEM201Q5SNT2 666 aa15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 ZNF610Q8N9Z0 462 aa15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 TSPEARQ8WU66 669 aa15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 CPPED1Q9BRF8 314 aaPredicted RBP15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 SPATA9Q9BWV2 254 aa15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 POLDIP3Q9BY77 421 aaKnown RBP15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 CLEC4MQ9H2X3 399 aaPredicted RBP15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 PLSCR4Q9NRQ2 329 aa15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 RASSF1Q9NS23 344 aa15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 RLIMQ9NVW2 624 aa15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 KLHL9Q9P2J3 617 aa15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 NDRG3Q9UGV2 375 aa15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 ZNF232Q9UNY5 417 aa15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 IFT52Q9Y366 437 aa15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 NDUFAF1Q9Y375 327 aa15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 TESMINQ9Y4I5 508 aa15.38■□□□□ 0.05
CHMP1A-208ENST00000550102 SULT2B1O00204 365 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms