RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 ZNF716A6NP11 495 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 SULT2B1O00204 365 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 NDUFS8O00217 210 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 GPR171O14626 319 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 AZIN1O14977 448 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 RIPK2O43353 540 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 DNPH1O43598 174 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 GLRA3O75311 464 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 URI1O94763 535 aaPredicted RBP8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 H6PDO95479 791 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 FGF4P08620 206 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 UBL4AP11441 157 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 BCKDHAP12694 445 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 CPA3P15088 417 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 SRD5A1P18405 259 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 NTF4P34130 210 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 RPL3P39023 403 aaKnown RBP8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 ZNF83P51522 516 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 SLC16A1P53985 500 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 SESN3P58005 492 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 ZNF141Q15928 474 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 WHAMMP3Q1A5X7 153 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 MST1LQ2TV78 715 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 NDUFAF6Q330K2 333 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 LSM12Q3MHD2 195 aaKnown RBP8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 B3GLCTQ6Y288 498 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 ARIH2OSQ8N7S6 290 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 NOA1Q8NC60 698 aaKnown RBP8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 OR56A1Q8NGH5 318 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 OR52N5Q8NH56 324 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 SLC25A43Q8WUT9 341 aaPredicted RBP8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 TMEM234Q8WY98 164 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 COQ8BQ96D53 544 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 THUMPD3Q9BV44 507 aaKnown RBP8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 NMUR2Q9GZQ4 415 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 MANSC1Q9H8J5 431 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 ACER3Q9NUN7 267 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 TAS2R16Q9NYV7 291 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 POU2F3Q9UKI9 436 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 NOSIPQ9Y314 301 aaKnown RBP8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 DNAJC15Q9Y5T4 150 aa8.65□□□□□ -1.02
TRAFD1-207ENST00000550051 NPIPA5A0A0B4J1W7 369 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 SERINC4A6NH21 518 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 DUXAA6NLW8 204 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 CCT8L1PA6NM43 557 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 NPIPA7E9PJI5 369 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 PDLIM1O00151 329 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 PLIN3O60664 434 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 RAD51DO75771 328 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 LINC00032P0C843 101 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 NPIPA8P0DM63 369 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 LAMP1P11279 417 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 EFNA1P20827 205 aaPredicted RBP8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 CRHR1P34998 444 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 APOBEC1P41238 236 aaKnown RBP8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 CCT5P48643 541 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 CLK1P49759 484 aaKnown RBP8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 H3F3AP84243 136 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 CHRNEQ04844 493 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 SQLEQ14534 574 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 SWI5Q1ZZU3 235 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 UGT3A2Q3SY77 523 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 SYT14P1Q58G82 188 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 FAM120AOSQ5T036 256 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 LIPMQ5VYY2 423 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 ABLIM2Q6H8Q1 611 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 FAM166AQ6J272 317 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 UBE2J2Q8N2K1 259 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 WDR31Q8NA23 367 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 OR7A2PQ8NGA2 310 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 CLHC1Q8NHS4 586 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 RFWD2Q8NHY2 731 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 HTRA1Q92743 480 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 APH1AQ96BI3 265 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 MOAP1Q96BY2 351 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 CHMP6Q96FZ7 201 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 BOD1Q96IK1 185 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 TRMOQ9BU70 441 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 QRSL1Q9H0R6 528 aaKnown RBP8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 FKRPQ9H9S5 495 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 PSMC3IPQ9P2W1 217 aaPredicted RBP8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 MALT1Q9UDY8 824 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 KCNE5Q9UJ90 142 aa8.64□□□□□ -1.03
TRAFD1-207ENST00000550051 LOC100289279A0A1B0GTE1 492 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 SLC35F4A4IF30 521 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 TMEM114B3SHH9 223 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 M0R1B8 84 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 SCAMP2O15127 329 aaKnown RBP8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 MRPL33O75394 65 aaKnown RBP8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 STX11O75558 287 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 LYPLA1O75608 230 aaPredicted RBP8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 PMS2P2O95744 297 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 CHEK2O96017 543 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 IGHV3-9P01782 118 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 PGRP06401 933 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 GUSBP08236 651 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 PGCP20142 388 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 IGFBP5P24593 272 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 HPCAL1P37235 193 aa8.63□□□□□ -1.03
TRAFD1-207ENST00000550051 NR4A2P43354 598 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms