RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 SULT2B1O00204 365 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 CFLARO15519 480 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 PHF1O43189 567 aaPredicted RBP13.57□□□□□ -0.24
RAB5C-205ENST00000550013 FCMRO60667 390 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 DNAJA2O60884 412 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 SLU7O95391 586 aaKnown RBP13.57□□□□□ -0.24
RAB5C-205ENST00000550013 UBTFL6P0CB48 400 aaPredicted RBP13.57□□□□□ -0.24
RAB5C-205ENST00000550013 TTKP33981 857 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 HBA1P69905 142 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 CHRNEQ04844 493 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 TMEM249Q2WGJ8 235 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 C6orf136Q5SQH8 315 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 IL23RQ5VWK5 629 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 SLC22A25Q6T423 547 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 CLEC2AQ6UVW9 174 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 TMPPEQ6ZT21 453 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 CLEC4FQ8N1N0 589 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 UBE2J2Q8N2K1 259 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 TMEM158Q8WZ71 300 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 ST8SIA1Q92185 356 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 ARL8AQ96BM9 186 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 MOAP1Q96BY2 351 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 DHRS9Q9BPW9 319 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 NMUR2Q9GZQ4 415 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 CBLN4Q9NTU7 201 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 POU2F3Q9UKI9 436 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 MKLN1Q9UL63 735 aa13.57□□□□□ -0.24
RAB5C-205ENST00000550013 MALRD1Q5VYJ5 2156 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 IGKV3D-15A0A087WSY6 115 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 CIB4A0PJX0 185 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 ZNF716A6NP11 495 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 NPHS1O60500 1241 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 BCAS1O75363 584 aaPredicted RBP13.56□□□□□ -0.24
RAB5C-205ENST00000550013 LYPLA1O75608 230 aaPredicted RBP13.56□□□□□ -0.24
RAB5C-205ENST00000550013 FAM157CP0CG43 387 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 TFPIP10646 304 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 CD40P25942 277 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 ARRB2P32121 409 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 NTF4P34130 210 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 FOXG1P55316 489 aaPredicted RBP13.56□□□□□ -0.24
RAB5C-205ENST00000550013 CSNK2A1P68400 391 aaPredicted RBP13.56□□□□□ -0.24
RAB5C-205ENST00000550013 ZNF141Q15928 474 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 ATP6AP1LQ52LC2 224 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 SYT14P1Q58G82 188 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 FBXW9Q5XUX1 488 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 TMEM108Q6UXF1 575 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 ZCCHC23Q6ZST2 131 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 MTDHQ86UE4 582 aaKnown RBP13.56□□□□□ -0.24
RAB5C-205ENST00000550013 RIMKLAQ8IXN7 391 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 ZNF525Q8N782 197 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 FNDC5Q8NAU1 212 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 RADILQ96JH8 1075 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 TNFRSF13CQ96RJ3 184 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 DUSP26Q9BV47 211 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 SERINC1Q9NRX5 453 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 ACER3Q9NUN7 267 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 EMC3Q9P0I2 261 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 NOSIPQ9Y314 301 aaKnown RBP13.56□□□□□ -0.24
RAB5C-205ENST00000550013 SLC25A15Q9Y619 301 aa13.56□□□□□ -0.24
RAB5C-205ENST00000550013 ARFGEF3Q5TH69 2177 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 CCT8L1PA6NM43 557 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 M0R1B8 84 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 STX11O75558 287 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 SKAP2O75563 359 aaPredicted RBP13.55□□□□□ -0.24
RAB5C-205ENST00000550013 UGT2B17O75795 530 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 CSTAP01040 98 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 DHRS4L1P0CG22 281 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 PGCP20142 388 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 PRPS1L1P21108 318 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 MATN1P21941 496 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 CASP9P55211 416 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 MAPK14Q16539 360 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 PGS1Q32NB8 556 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 SSX8Q7RTT4 187 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 C6orf120Q7Z4R8 191 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 CLECL1Q8IZS7 167 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 FBXL14Q8N1E6 418 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 MUC15Q8N387 334 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 NATD1Q8N6N6 113 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 TMEM234Q8WY98 164 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 APH1AQ96BI3 265 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 APOPT1Q96IL0 206 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 ARL5BQ96KC2 179 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 KCNK17Q96T54 332 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 PRPF18Q99633 342 aaKnown RBP13.55□□□□□ -0.24
RAB5C-205ENST00000550013 C1QTNF6Q9BXI9 259 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 BHLHE41Q9C0J9 482 aaPredicted RBP13.55□□□□□ -0.24
RAB5C-205ENST00000550013 MANSC1Q9H8J5 431 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 EML4Q9HC35 981 aaKnown RBP13.55□□□□□ -0.24
RAB5C-205ENST00000550013 CTPS2Q9NRF8 586 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 SLC17A7Q9P2U7 560 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 CDC42EP3Q9UKI2 254 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 MGAT4BQ9UQ53 548 aa13.55□□□□□ -0.24
RAB5C-205ENST00000550013 RNF103-CHMP3A0A140T963 221 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 ELOA3DA6NLF2 546 aaPredicted RBP13.54□□□□□ -0.24
RAB5C-205ENST00000550013 G6PDP11413 515 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 PTAFRP25105 342 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 FABP6P51161 128 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 DSCR9P59020 149 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 VLDLRP98155 873 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms