RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 DPH1Q9BZG8 443 aa9.16□□□□□ -0.94
RAB5B-206ENST00000549505 CAPN10Q9HC96 672 aa9.16□□□□□ -0.94
RAB5B-206ENST00000549505 NRIP3Q9NQ35 241 aa9.16□□□□□ -0.94
RAB5B-206ENST00000549505 SLC22A11Q9NSA0 550 aa9.16□□□□□ -0.94
RAB5B-206ENST00000549505 HIF3AQ9Y2N7 669 aa9.16□□□□□ -0.94
RAB5B-206ENST00000549505 TMEM127O75204 238 aa9.15□□□□□ -0.94
RAB5B-206ENST00000549505 PTBP1P26599 531 aaKnown RBP eCLIP9.15□□□□□ -0.944e-8■■■■■ 36.6
RAB5B-206ENST00000549505 UQCRC1P31930 480 aa9.15□□□□□ -0.94
RAB5B-206ENST00000549505 SLC25A1P53007 311 aa9.15□□□□□ -0.94
RAB5B-206ENST00000549505 MED22Q15528 200 aa9.15□□□□□ -0.94
RAB5B-206ENST00000549505 TRAM1Q15629 374 aa9.15□□□□□ -0.94
RAB5B-206ENST00000549505 EMC4Q5J8M3 183 aa9.15□□□□□ -0.94
RAB5B-206ENST00000549505 THSD4Q6ZMP0 1018 aa9.15□□□□□ -0.94
RAB5B-206ENST00000549505 BCDIN3DQ7Z5W3 292 aaKnown RBP9.15□□□□□ -0.94
RAB5B-206ENST00000549505 ZBTB46Q86UZ6 589 aa9.15□□□□□ -0.94
RAB5B-206ENST00000549505 EXD3Q8N9H8 876 aa9.15□□□□□ -0.94
RAB5B-206ENST00000549505 MCFD2Q8NI22 146 aa9.15□□□□□ -0.94
RAB5B-206ENST00000549505 SLC25A46Q96AG3 418 aa9.15□□□□□ -0.94
RAB5B-206ENST00000549505 CCDC74AQ96AQ1 378 aa9.15□□□□□ -0.94
RAB5B-206ENST00000549505 MIR1-1HGQ9H1L0 117 aa9.15□□□□□ -0.94
RAB5B-206ENST00000549505 ZNF337Q9Y3M9 751 aa9.15□□□□□ -0.94
RAB5B-206ENST00000549505 SPTBN5Q9NRC6 3674 aaKnown RBP9.15□□□□□ -0.94
RAB5B-206ENST00000549505 RANBP2P49792 3224 aaKnown RBP9.15□□□□□ -0.95
RAB5B-206ENST00000549505 IGLV3-32A0A0A0MS00 114 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 NPIPA5A0A0B4J1W7 369 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 FAM86C2PA6NEL3 165 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 TMEM221A6NGB7 291 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 NPIPA7E9PJI5 369 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 FADS1O60427 444 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 SC5DO75845 299 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 NPIPA8P0DM63 369 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 HK1P19367 917 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 TRA2AQ13595 282 aaKnown RBP eCLIP9.15□□□□□ -0.95
RAB5B-206ENST00000549505 ALG10BQ5I7T1 473 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 ZNF322Q6U7Q0 402 aaPredicted RBP9.15□□□□□ -0.95
RAB5B-206ENST00000549505 DBX2Q6ZNG2 339 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 MISPQ8IVT2 679 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 C9orf40Q8IXQ3 194 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 NUBPLQ8TB37 319 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 NAT6Q93015 286 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 SGTBQ96EQ0 304 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 NDEL1Q9GZM8 345 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 ENKD1Q9H0I2 346 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 CTPS2Q9NRF8 586 aa9.15□□□□□ -0.95
RAB5B-206ENST00000549505 CRNNQ9UBG3 495 aaPredicted RBP9.15□□□□□ -0.95
RAB5B-206ENST00000549505 NTN3O00634 580 aaPredicted RBP9.14□□□□□ -0.95
RAB5B-206ENST00000549505 NDUFB2O95178 105 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 UTS2O95399 124 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 ASAH2BP0C7U1 165 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 FGF5P12034 268 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 BMP7P18075 431 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 TGM1P22735 817 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 PRPS1P60891 318 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 ACTC1P68032 377 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 ACTA1P68133 377 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 RIN1Q13671 783 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 HSDL2Q6YN16 418 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 KLHL36Q8N4N3 616 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 POMGNT2Q8NAT1 580 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 OR9Q1Q8NGQ5 310 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 CEP76Q8TAP6 659 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 KIAA1143Q96AT1 154 aaPredicted RBP9.14□□□□□ -0.95
RAB5B-206ENST00000549505 COX4I2Q96KJ9 171 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 PTCHD1Q96NR3 888 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 SOSTQ9BQB4 213 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 NUDT9Q9BW91 350 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 VN1R1Q9GZP7 353 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 WWTR1Q9GZV5 400 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 ATP13A2Q9NQ11 1180 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 TXNL4BQ9NX01 149 aaKnown RBP9.14□□□□□ -0.95
RAB5B-206ENST00000549505 FBXO4Q9UKT5 387 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 XIRP2A4UGR9 3374 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 OR6C70A6NIJ9 312 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 CSTAP01040 98 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 IGHMP01871 453 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 UBL4AP11441 157 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 CKMT1AP12532 417 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 CFL1P23528 166 aaKnown RBP9.14□□□□□ -0.95
RAB5B-206ENST00000549505 SOX6P35712 828 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 MLLT1Q03111 559 aaPredicted RBP9.14□□□□□ -0.95
RAB5B-206ENST00000549505 TMEM81Q6P7N7 255 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 TMEM205Q6UW68 189 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 C5orf46Q6UWT4 87 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 TRILQ7L0X0 811 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 FAM122BQ7Z309 247 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 ZNF554Q86TJ5 538 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 SYS1Q8N2H4 156 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 TRMT61AQ96FX7 289 aaKnown RBP9.14□□□□□ -0.95
RAB5B-206ENST00000549505 TEAD3Q99594 435 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 CTRCQ99895 268 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 CCDC32Q9BV29 185 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 NXF5Q9H1B4 397 aaKnown RBP9.14□□□□□ -0.95
RAB5B-206ENST00000549505 SP140LQ9H930 580 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 ADGRL4Q9HBW9 690 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 SSR3Q9UNL2 185 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 SCN3AQ9NY46 2000 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 ZNF264O43296 627 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 CDC40O60508 579 aaKnown RBP eCLIP9.14□□□□□ -0.95
RAB5B-206ENST00000549505 NPIPB7O75200 414 aa9.14□□□□□ -0.95
RAB5B-206ENST00000549505 ZNF883P0CG24 379 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms