RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 OIP5O43482 229 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 C1QCP02747 245 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 LINGO3P0C6S8 592 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 NPIPA8P0DM63 369 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 KITP10721 976 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 SLC25A16P16260 332 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 MATN1P21941 496 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 ME2P23368 584 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 ELK4P28324 431 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 ADH6P28332 368 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 AGTR1P30556 359 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 NME5P56597 212 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 RPS26P62854 115 aaKnown RBP10.8□□□□□ -0.68
DDX54-206ENST00000549271 SQLEQ14534 574 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 FAM174BQ3ZCQ3 159 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 PDLIM3Q53GG5 364 aaPredicted RBP10.8□□□□□ -0.68
DDX54-206ENST00000549271 SPANXN4Q5MJ08 99 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 DCST2Q5T1A1 773 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.8□□□□□ -0.68
DDX54-206ENST00000549271 HBMQ6B0K9 141 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 MAVSQ7Z434 540 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 SPATA19Q7Z5L4 167 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 MTERF4Q7Z6M4 381 aaKnown RBP10.8□□□□□ -0.68
DDX54-206ENST00000549271 GABRG1Q8N1C3 465 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 STEAP2Q8NFT2 490 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 OR5D16Q8NGK9 328 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 SGMS2Q8NHU3 365 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 RNF128Q8TEB7 428 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 ZNF75CPQ92670 426 aaPredicted RBP10.8□□□□□ -0.68
DDX54-206ENST00000549271 OSTF1Q92882 214 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 CHMP6Q96FZ7 201 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 C1orf159Q96HA4 380 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 KLHL15Q96M94 604 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 RNF145Q96MT1 663 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 SDF2Q99470 211 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 USB1Q9BQ65 265 aaKnown RBP10.8□□□□□ -0.68
DDX54-206ENST00000549271 B3GALT5Q9Y2C3 310 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 GPR45Q9Y5Y3 372 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 PLCE1Q9P212 2302 aa10.8□□□□□ -0.68
DDX54-206ENST00000549271 TRPC5OSA6NMA1 111 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 SCDO00767 359 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 TNFSF11O14788 317 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 KLF11O14901 512 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 GCM2O75603 506 aaPredicted RBP10.79□□□□□ -0.68
DDX54-206ENST00000549271 CPSF4O95639 269 aaKnown RBP10.79□□□□□ -0.68
DDX54-206ENST00000549271 CD3EP07766 207 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 KRT16P08779 473 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 HPGDP15428 266 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 UQCRC2P22695 453 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 SOAT1P35610 550 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 NUDT6P53370 316 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 CLNS1AP54105 237 aaKnown RBP10.79□□□□□ -0.68
DDX54-206ENST00000549271 ATP12AP54707 1039 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 CARD18P57730 90 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 RNPS1Q15287 305 aaKnown RBP10.79□□□□□ -0.68
DDX54-206ENST00000549271 ZNF239Q16600 458 aaKnown RBP10.79□□□□□ -0.68
DDX54-206ENST00000549271 SLC9B1Q4ZJI4 515 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 TTMPQ5BVD1 217 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 ANXA8L1Q5VT79 327 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 PPP4R4Q6NUP7 873 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 CLEC2AQ6UVW9 174 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 LILRA2Q8N149 483 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 DEPDC4Q8N2C3 294 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 RFLNBQ8N5W9 214 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.79□□□□□ -0.68
DDX54-206ENST00000549271 OR4A15Q8NGL6 344 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 B4GALNT2Q8NHY0 566 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 MIPOL1Q8TD10 442 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 CPNE4Q96A23 557 aaPredicted RBP10.79□□□□□ -0.68
DDX54-206ENST00000549271 ZNF524Q96C55 264 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 ZMYND19Q96E35 227 aaPredicted RBP10.79□□□□□ -0.68
DDX54-206ENST00000549271 SH3YL1Q96HL8 342 aaPredicted RBP10.79□□□□□ -0.68
DDX54-206ENST00000549271 MAELQ96JY0 434 aaKnown RBP10.79□□□□□ -0.68
DDX54-206ENST00000549271 TACO1Q9BSH4 297 aaKnown RBP10.79□□□□□ -0.68
DDX54-206ENST00000549271 TRIM2Q9C040 744 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 HOXD1Q9GZZ0 328 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 ALG2Q9H553 416 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 TIGARQ9NQ88 270 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 KCNS2Q9ULS6 477 aa10.79□□□□□ -0.68
DDX54-206ENST00000549271 RNF103-CHMP3A0A140T963 221 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 DUXAA6NLW8 204 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 C9JVG2 144 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 E9PBE3 544 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 SLCO1B7G3V0H7 640 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 TCF21O43680 179 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 FCMRO60667 390 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 OPN1LWP04000 364 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 ATP6V1C1P21283 382 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 S100A3P33764 101 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 RNF144AP50876 292 aaPredicted RBP10.78□□□□□ -0.68
DDX54-206ENST00000549271 SUMO3P55854 103 aaPredicted RBP10.78□□□□□ -0.68
DDX54-206ENST00000549271 ZNF117Q03924 483 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 DPY19L1Q2PZI1 675 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 ARHGAP11BQ3KRB8 267 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 SFRP5Q5T4F7 317 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 AP1ARQ63HQ0 302 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 SAXO2Q658L1 398 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 FAM166AQ6J272 317 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 CBLN3Q6UW01 205 aa10.78□□□□□ -0.68
DDX54-206ENST00000549271 TFAP2EQ6VUC0 442 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms