RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 DHRS12A0PJE2 317 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 TRAPPC13A5PLN9 417 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 CEACAM18A8MTB9 384 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 TBC1D3LB9A6J9 549 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 DEAF1O75398 565 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 RGS9O75916 674 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 ABHD16AO95870 558 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 LDLRP01130 860 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 TBC1D3HP0C7X1 549 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FPR2P25090 351 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 MST1P26927 711 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 PCSK6P29122 969 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 PYCR1P32322 319 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 CFHR2P36980 270 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 DSCR4P56555 118 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 PRPS1P60891 318 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 RAB40BQ12829 278 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 TPBGQ13641 420 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 TRAM2Q15035 370 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 CDONQ4KMG0 1287 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 SOWAHCQ53LP3 525 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 DCST2Q5T1A1 773 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 TBC1D3CQ6IPX1 549 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 RBM23Q86U06 439 aaKnown RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 CCDC25Q86WR0 208 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 TBC1D3Q8IZP1 549 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 HORMAD2Q8N7B1 307 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 BCORP1Q8N888 145 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 TMEM52Q8NDY8 209 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 VANGL1Q8TAA9 524 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 MAGED4Q96JG8 741 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 MDFIQ99750 246 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 VRK1Q99986 396 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 KLHL4Q9C0H6 718 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 NDEL1Q9GZM8 345 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 VN1R1Q9GZP7 353 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 PLEKHA1Q9HB21 404 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 NECTIN3Q9NQS3 549 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 CMC2Q9NRP2 79 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FARSBQ9NSD9 589 aaKnown RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 PNPLA3Q9NST1 481 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 GIMAP4Q9NUV9 329 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 ADPRHL2Q9NX46 363 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 ALKBH4Q9NXW9 302 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 CPSF2Q9P2I0 782 aaKnown RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 CLCF1Q9UBD9 225 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 PSORS1C1Q9UIG5 152 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 SLCO1B1Q9Y6L6 691 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 A0A0A6YYH2 397 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 TRAV1-2A0A0B4J238 106 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FAM90A10PA6NDY2 464 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FAM90A18PA6NE21 464 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FAM90A16PA6NEW6 464 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 SERINC4A6NH21 518 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FAM90A20PA6NIJ5 464 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 A6NJ64 397 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FAM90A8PA6NJQ4 464 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FAM90A7PA6NKC0 464 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF726A6NNF4 738 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 MEI4A8MW99 385 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FAM90A22PA8MWA6 464 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FAM90A12PA8MX19 464 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FAM90A5PA8MXJ8 464 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FAM90A23PA8MXZ1 464 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 EVPLLA8MZ36 301 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 GUCA1CO95843 209 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 PAK4O96013 591 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 IGKV1D-16P01601 117 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 ZGLP1P0C6A0 271 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FAM90A15PP0C7V4 464 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FAM90A13PP0C7W8 464 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FAM90A14PP0C7W9 464 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FAM90A24PP0C7X0 464 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 CEACAM8P31997 349 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 TMED10P49755 219 aaKnown RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 UGT2B15P54855 530 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 CDK6Q00534 326 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 SORDQ00796 357 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 TMEM42Q69YG0 159 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 ULK3Q6PHR2 472 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 METAP1DQ6UB28 335 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF620Q6ZNG0 422 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 PRSS45Q7RTY3 260 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 GRINAQ7Z429 371 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 FAM20CQ8IXL6 584 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 CADM2Q8N3J6 435 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 ARIH2OSQ8N7S6 290 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 POC1BQ8TC44 478 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 MIB2Q96AX9 1013 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 DDIT4LQ96D03 193 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 SNX22Q96L94 193 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 NSMCE2Q96MF7 247 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 NUF2Q9BZD4 464 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 TBL1XR1Q9BZK7 514 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 YIPF3Q9GZM5 350 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 TCEAL2Q9H3H9 227 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-212ENST00000549162 CD93Q9NPY3 652 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 SCOCQ9UIL1 159 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 AP4S1Q9Y587 144 aa4.42□□□□□ -1.7
SCAF11-212ENST00000549162 CFAP20Q9Y6A4 193 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms