RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 CHIAQ9BZP6 476 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 RNF32Q9H0A6 362 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 KLF15Q9UIH9 416 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 IKZF2Q9UKS7 526 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 IQCMA0A1B0GVH7 501 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 TVP23AA6NH52 213 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 GPR75O95800 540 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 HLA-DQA2P01906 255 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 EIF4EP06730 217 aaKnown RBP12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 ZNF3P17036 446 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 EDNRAP25101 427 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 PPP3R1P63098 170 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 ACSM3Q53FZ2 586 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 EIPR1Q53HC9 387 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 TMEM91Q6ZNR0 172 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 ZNF511Q8NB15 262 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 OR4D9Q8NGE8 314 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 SYNDIG1Q9H7V2 258 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 MEPEQ9NQ76 525 aaPredicted RBP12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 ING1Q9UK53 422 aaPredicted RBP12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 PCDHGB2Q9Y5G2 931 aa12.64□□□□□ -0.39
PRPF40B-209ENST00000548825 PRRC2CQ9Y520 2896 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 A0A087WV48 116 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 A0A0B4J293 547 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 PLGP00747 810 aaPredicted RBP12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 CSTAP01040 98 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 TEKQ02763 1124 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 KCNAB1Q14722 419 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 BTBD16Q32M84 506 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 SFRP4Q6FHJ7 346 aaPredicted RBP12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 C19orf48Q6RUI8 117 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 GJD3Q8N144 294 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 PHOSPHO1Q8TCT1 267 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 HSPA12BQ96MM6 686 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 TGM7Q96PF1 710 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 OR14A2Q96R54 314 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 SLC22A7Q9Y694 548 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 COL6A3P12111 3177 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 C11orf98E9PRG8 122 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 PRICKLE3O43900 615 aaPredicted RBP12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 SELENOFO60613 162 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 RCBTB2O95199 551 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 MT-ND5P03915 603 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 DBIP07108 87 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 THEGLP0DJG4 465 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 NID1P14543 1247 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 AHCYP23526 432 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 CCR6P51684 374 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 MLC1Q15049 377 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 NIPAL3Q6P499 406 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 GPR135Q8IZ08 494 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 CLDN22Q8N7P3 220 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 OR5H6Q8NGV6 325 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 OR4C3Q8NH37 302 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 SLC7A6Q92536 515 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 UPRTQ96BW1 309 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 KCNN2Q9H2S1 579 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 PIGUQ9H490 435 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 SF3B6Q9Y3B4 125 aaKnown RBP12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 HEATR5AQ86XA9 2040 aa12.63□□□□□ -0.39
PRPF40B-209ENST00000548825 C2orf74A8MZ97 194 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 SYT5O00445 386 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 TBX19O60806 448 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 RGS9O75916 674 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 FBXO45P0C2W1 286 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 HIST1H1CP16403 213 aaKnown RBP12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 AKT2P31751 481 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 GLYR1Q49A26 553 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 NKAIN2Q5VXU1 208 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 OR5M10Q6IEU7 315 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 USP53Q70EK8 1073 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 GDPD1Q8N9F7 314 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 PHOSPHO2Q8TCD6 241 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 THAP3Q8WTV1 239 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 SLC25A36Q96CQ1 311 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 TRBV2A0A0J9YWF9 115 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 ARHGEF9O43307 516 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 SEMA4FO95754 770 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 OR1D4P47884 311 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 FXYD6P3P58550 94 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 HYAL1Q12794 435 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 ADAM15Q13444 863 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 SMAD2Q15796 467 aaKnown RBP12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 LINGO2Q7L985 606 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 CDRT4Q8N9R6 151 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 TOE1Q96GM8 510 aaKnown RBP12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 MAP3K3Q99759 626 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 WBP1LQ9NX94 342 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 NOX1Q9Y5S8 564 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 IRGMA1A4Y4 181 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 KDM4EB2RXH2 506 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 GPANK1O95872 356 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 MT-ND4P03905 459 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 NDUFS1P28331 727 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 VASPP50552 380 aaPredicted RBP12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 GAS1P54826 345 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 SQSTM1Q13501 440 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 FAM205BPQ63HN1 556 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 FAAP20Q6NZ36 180 aa12.62□□□□□ -0.39
PRPF40B-209ENST00000548825 NOXA1Q86UR1 476 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms