RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 RGS16O15492 202 aaPredicted RBP15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 ZNF500O60304 480 aaPredicted RBP15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 LYZL6O75951 148 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 SNUPNO95149 360 aaKnown RBP15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 AGR2O95994 175 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 C1QCP02747 245 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 CD3EP07766 207 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 DANCRP0C864 163 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 SLC1A6P48664 564 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 KHKP50053 298 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 RPL14P50914 215 aaKnown RBP15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 BSPH1Q075Z2 132 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 CAPRIN1Q14444 709 aaKnown RBP15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 CASP8Q14790 479 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 DPY19L1Q2PZI1 675 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 ATAD3BQ5T9A4 648 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 AP1ARQ63HQ0 302 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 TMPPEQ6ZT21 453 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 LRRC34Q8IZ02 419 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 KBTBD8Q8NFY9 601 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 PIWIL2Q8TC59 973 aaKnown RBP15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 SLC25A43Q8WUT9 341 aaPredicted RBP15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 NEUROG1Q92886 237 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 FBXW5Q969U6 566 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 ARL8AQ96BM9 186 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 ROPN1LQ96C74 230 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 NEURL3Q96EH8 262 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 USB1Q9BQ65 265 aaKnown RBP15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 CCDC106Q9BWC9 280 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 NUF2Q9BZD4 464 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 NGBQ9NPG2 151 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 LAMP3Q9UQV4 416 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 SLC35A3Q9Y2D2 325 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 PRAMEF27A3QJZ7 478 aa15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 E9PBE3 544 aa15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 OVOL3O00110 214 aa15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 ADAM11O75078 769 aa15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 CPSF4O95639 269 aaKnown RBP15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 SOD3P08294 240 aa15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 LBPP18428 481 aa15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 BGNP21810 368 aa15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 MPP2Q14168 576 aa15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 FAM174BQ3ZCQ3 159 aa15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 TNFAIP8L3Q5GJ75 292 aa15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 ANXA8L1Q5VT79 327 aa15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 OGFOD2Q6N063 350 aa15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 HMGN2P46Q86SG4 172 aa15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 XAGE5Q8WWM1 108 aa15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 SLC35A5Q9BS91 424 aa15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 MEAF6Q9HAF1 191 aa15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 SERINC1Q9NRX5 453 aa15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 CHRNA9Q9UGM1 479 aa15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 SONP18583 2426 aaKnown RBP15.39■□□□□ 0.05
CHMP1A-205ENST00000548650 IGKV3D-15A0A087WSY6 115 aa15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 DPRXA6NFQ7 191 aa15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 CLDN24A6NM45 220 aa15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 ZNF716A6NP11 495 aa15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 C9JVG2 144 aa15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 SULT2B1O00204 365 aa15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 ALDOCP09972 364 aaKnown RBP15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 IGHV1-2P23083 117 aa15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 PCSK6P29122 969 aa15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 CLNS1AP54105 237 aaKnown RBP15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 CSNK2A1P68400 391 aaPredicted RBP15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 ZNF672Q499Z4 452 aaPredicted RBP15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 GALNT5Q7Z7M9 940 aa15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 LSRQ86X29 649 aaPredicted RBP15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 KIRREL3Q8IZU9 778 aa15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 VPS37AQ8NEZ2 397 aa15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 ZNF775Q96BV0 537 aaPredicted RBP15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 ZG16BQ96DA0 208 aa15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 TEX37Q96LM6 180 aa15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 CCDC115Q96NT0 180 aa15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 TRIM2Q9C040 744 aa15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 EXOSC3Q9NQT5 275 aaKnown RBP15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 CTPS2Q9NRF8 586 aa15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 MARCOQ9UEW3 520 aaPredicted RBP15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 MAGED1Q9Y5V3 778 aaPredicted RBP15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 SPIN1Q9Y657 262 aaPredicted RBP15.38■□□□□ 0.05
CHMP1A-205ENST00000548650 HMGN4O00479 90 aa15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 CHI3L1P36222 383 aaPredicted RBP15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 APOBEC1P41238 236 aaKnown RBP15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 HPCAP84074 193 aa15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 KRTAP1-1Q07627 177 aa15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 BST1Q10588 318 aa15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 PDK3Q15120 406 aa15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 PPA1Q15181 289 aa15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 STK11Q15831 433 aa15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 PGGHGQ32M88 737 aa15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 GRINAQ7Z429 371 aa15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 MTDHQ86UE4 582 aaKnown RBP15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 ZNF563Q8TA94 476 aa15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 ARL5BQ96KC2 179 aa15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 PNPOQ9NVS9 261 aa15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 AIG1Q9NVV5 245 aa15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 NPAP1Q9NZP6 1156 aa15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 EMC3Q9P0I2 261 aa15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 BTNL2Q9UIR0 455 aa15.37■□□□□ 0.05
CHMP1A-205ENST00000548650 INAFM1C9JVW0 142 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms