RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 E7EQL1 145 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 SLC28A1O00337 649 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 LSM1O15116 133 aaKnown RBP14.53□□□□□ -0.08
SSH1-208ENST00000548522 RGS14O43566 566 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 IGHV3-9P01782 118 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 FAM157CP0CG43 387 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 SLC7A1P30825 629 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 NUDT6P53370 316 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 DNAJB13P59910 316 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 SRSF2Q01130 221 aaKnown RBP14.53□□□□□ -0.08
SSH1-208ENST00000548522 SELENBP1Q13228 472 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 KRTAP24-1Q3LI83 254 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 DCST2Q5T1A1 773 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 LIPMQ5VYY2 423 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 C11orf71Q6IPW1 123 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 ZCCHC12Q6PEW1 402 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 TMCO5AQ8N6Q1 288 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 ZNF525Q8N782 197 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 ZNF614Q8N883 585 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 OR7A2PQ8NGA2 310 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 OR10H5Q8NGA6 315 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 METTL2AQ96IZ6 378 aaKnown RBP14.53□□□□□ -0.08
SSH1-208ENST00000548522 STACQ99469 402 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 RASSF4Q9H2L5 321 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 PIGUQ9H490 435 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 SAR1AQ9NR31 198 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 KLHL9Q9P2J3 617 aa14.53□□□□□ -0.08
SSH1-208ENST00000548522 CENPVL1A0A0U1RR11 272 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 A0A1W2PR80 420 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 NPIPB9F8W1W9 429 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 AZIN1O14977 448 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 CYTIPO60759 359 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 SERPINE1P05121 402 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 NEFHP12036 1026 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 BCKDHAP12694 445 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 ATP6V1C1P21283 382 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 BGNP21810 368 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 CCR4P51679 360 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 SUMO3P55854 103 aaPredicted RBP14.52□□□□□ -0.09
SSH1-208ENST00000548522 RAC3P60763 192 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 RASGEF1BQ0VAM2 473 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 TP53BP2Q13625 1128 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 QPRTQ15274 297 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 OLIG3Q7RTU3 272 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 PIAS4Q8N2W9 510 aaPredicted RBP14.52□□□□□ -0.09
SSH1-208ENST00000548522 SLC43A2Q8N370 569 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 MRGPRX4Q96LA9 322 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 LRRC37BQ96QE4 947 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 OR5B2Q96R09 309 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 RHNO1Q9BSD3 238 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 GRIP2Q9C0E4 1043 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 FAIMQ9NVQ4 179 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 GPATCH2Q9NW75 528 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 OXSMQ9NWU1 459 aa14.52□□□□□ -0.09
SSH1-208ENST00000548522 OR5H1A6NKK0 313 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 SCAMP2O15127 329 aaKnown RBP14.51□□□□□ -0.09
SSH1-208ENST00000548522 RAD51DO75771 328 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 FESP07332 822 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 LAMP1P11279 417 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 ZNF16P17020 682 aaPredicted RBP14.51□□□□□ -0.09
SSH1-208ENST00000548522 GGT1P19440 569 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 ZNF83P51522 516 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 NRF1Q16656 503 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 SLC25A53Q5H9E4 307 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 TIMM23BQ5SRD1 257 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 AGAP6Q5VW22 663 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 KANK2Q63ZY3 851 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 FITM2Q8N6M3 262 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 ZNF433Q8N7K0 673 aaPredicted RBP14.51□□□□□ -0.09
SSH1-208ENST00000548522 ZNF527Q8NB42 609 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 OR5D16Q8NGK9 328 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 OR52N5Q8NH56 324 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 MUCL1Q96DR8 90 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 DNAJA3Q96EY1 480 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 TNFRSF13CQ96RJ3 184 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 DNAJC15Q9Y5T4 150 aa14.51□□□□□ -0.09
SSH1-208ENST00000548522 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.5□□□□□ -0.093e-6■■■■■ 27.8
SSH1-208ENST00000548522 GOLGA8QA0A0J9YX86 632 aa14.5□□□□□ -0.09
SSH1-208ENST00000548522 GOLGA8OA6NCC3 632 aa14.5□□□□□ -0.09
SSH1-208ENST00000548522 TMEM114B3SHH9 223 aa14.5□□□□□ -0.09
SSH1-208ENST00000548522 GOLGA8NF8WBI6 632 aa14.5□□□□□ -0.09
SSH1-208ENST00000548522 GTPBP1O00178 669 aaKnown RBP14.5□□□□□ -0.09
SSH1-208ENST00000548522 ETV2O00321 342 aaPredicted RBP14.5□□□□□ -0.09
SSH1-208ENST00000548522 LY6HO94772 140 aa14.5□□□□□ -0.09
SSH1-208ENST00000548522 UBOX5O94941 541 aa14.5□□□□□ -0.09
SSH1-208ENST00000548522 PGM3O95394 542 aa14.5□□□□□ -0.09
SSH1-208ENST00000548522 HSPA4LO95757 839 aa14.5□□□□□ -0.09
SSH1-208ENST00000548522 CHRNGP07510 517 aa14.5□□□□□ -0.09
SSH1-208ENST00000548522 UBL4AP11441 157 aa14.5□□□□□ -0.09
SSH1-208ENST00000548522 CPA3P15088 417 aa14.5□□□□□ -0.09
SSH1-208ENST00000548522 TTKP33981 857 aa14.5□□□□□ -0.09
SSH1-208ENST00000548522 RASSF2P50749 326 aa14.5□□□□□ -0.09
SSH1-208ENST00000548522 ATP12AP54707 1039 aa14.5□□□□□ -0.09
SSH1-208ENST00000548522 CASP9P55211 416 aa14.5□□□□□ -0.09
SSH1-208ENST00000548522 FOXG1P55316 489 aaPredicted RBP14.5□□□□□ -0.09
SSH1-208ENST00000548522 RPS26P62854 115 aaKnown RBP14.5□□□□□ -0.09
SSH1-208ENST00000548522 CHRNEQ04844 493 aa14.5□□□□□ -0.09
SSH1-208ENST00000548522 BST1Q10588 318 aa14.5□□□□□ -0.09
SSH1-208ENST00000548522 STX3Q13277 289 aa14.5□□□□□ -0.09
SSH1-208ENST00000548522 PTGR1Q14914 329 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms