RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 TMCC2O75069 709 aa17.04■□□□□ 0.32
PRPF40B-208ENST00000548436 CLPSP04118 112 aa17.04■□□□□ 0.32
PRPF40B-208ENST00000548436 SBK2P0C263 348 aa17.04■□□□□ 0.32
PRPF40B-208ENST00000548436 ZNF3P17036 446 aa17.04■□□□□ 0.32
PRPF40B-208ENST00000548436 HK1P19367 917 aa17.04■□□□□ 0.32
PRPF40B-208ENST00000548436 CD27P26842 260 aa17.04■□□□□ 0.32
PRPF40B-208ENST00000548436 PPM1FP49593 454 aaPredicted RBP17.04■□□□□ 0.32
PRPF40B-208ENST00000548436 ZNF615Q8N8J6 731 aa17.04■□□□□ 0.32
PRPF40B-208ENST00000548436 RNF32Q9H0A6 362 aa17.04■□□□□ 0.32
PRPF40B-208ENST00000548436 MARCH7Q9H992 704 aa17.04■□□□□ 0.32
PRPF40B-208ENST00000548436 SOHLH2Q9NX45 425 aa17.04■□□□□ 0.32
PRPF40B-208ENST00000548436 CA14Q9ULX7 337 aa17.04■□□□□ 0.32
PRPF40B-208ENST00000548436 BAIAP2Q9UQB8 552 aa17.04■□□□□ 0.32
PRPF40B-208ENST00000548436 COLQQ9Y215 455 aaPredicted RBP17.04■□□□□ 0.32
PRPF40B-208ENST00000548436 TRIOBPQ9H2D6 2365 aa17.04■□□□□ 0.32
PRPF40B-208ENST00000548436 ABCA7Q8IZY2 2146 aa17.04■□□□□ 0.32
PRPF40B-208ENST00000548436 CEP192Q8TEP8 1941 aa17.04■□□□□ 0.32
PRPF40B-208ENST00000548436 METTL12A8MUP2 240 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 RGS9O75916 674 aaPredicted RBP17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 IFNA16P05015 189 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 GALP22466 123 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 SLC6A6P31641 620 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 PPP3R1P63098 170 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 GDPD1Q8N9F7 314 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 ZSCAN1Q8NBB4 408 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 OR5M3Q8NGP4 307 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 OR5W2Q8NH69 310 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 ADAMTS18Q8TE60 1221 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 CHAC2Q8WUX2 184 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 SLC35B4Q969S0 331 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 SENP5Q96HI0 755 aaPredicted RBP17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 ZMIZ1Q9ULJ6 1067 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 OR10H1Q9Y4A9 318 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 SERINC4A6NH21 518 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 LRRN3E7EW58 273 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 ZNF749O43361 778 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 CSTAP01040 98 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 HSD17B7P56937 341 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 ZNF85Q03923 595 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 SCN1BQ07699 218 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 PYDC2Q56P42 97 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 LRRC17Q8N6Y2 441 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 SMPDL3BQ92485 455 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 ERMAPQ96PL5 475 aaPredicted RBP17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 LMF1Q96S06 567 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 LRRN3Q9H3W5 708 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 TRIM36Q9NQ86 728 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 INPP5EQ9NRR6 644 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 RPS6KB2Q9UBS0 482 aa17.03■□□□□ 0.32
PRPF40B-208ENST00000548436 ATP6V1G1O75348 118 aa17.02■□□□□ 0.32
PRPF40B-208ENST00000548436 TMED10P49755 219 aaKnown RBP17.02■□□□□ 0.32
PRPF40B-208ENST00000548436 DEFB133Q30KQ1 61 aa17.02■□□□□ 0.32
PRPF40B-208ENST00000548436 NKAIN2Q5VXU1 208 aa17.02■□□□□ 0.32
PRPF40B-208ENST00000548436 CNIH2Q6PI25 160 aa17.02■□□□□ 0.32
PRPF40B-208ENST00000548436 NR2C2APQ86WQ0 139 aa17.02■□□□□ 0.32
PRPF40B-208ENST00000548436 C17orf82Q86X59 251 aaPredicted RBP17.02■□□□□ 0.32
PRPF40B-208ENST00000548436 KIAA1143Q96AT1 154 aaPredicted RBP17.02■□□□□ 0.32
PRPF40B-208ENST00000548436 SOSTQ9BQB4 213 aa17.02■□□□□ 0.32
PRPF40B-208ENST00000548436 PPIL3Q9H2H8 161 aaKnown RBP17.02■□□□□ 0.32
PRPF40B-208ENST00000548436 CHRNA9Q9UGM1 479 aa17.02■□□□□ 0.32
PRPF40B-208ENST00000548436 SERTAD3Q9UJW9 196 aa17.02■□□□□ 0.32
PRPF40B-208ENST00000548436 PAIP2BQ9ULR5 123 aaKnown RBP17.02■□□□□ 0.32
PRPF40B-208ENST00000548436 MAU2Q9Y6X3 613 aa17.02■□□□□ 0.32
PRPF40B-208ENST00000548436 EML5Q05BV3 1969 aa17.02■□□□□ 0.31
PRPF40B-208ENST00000548436 SEC14L5O43304 696 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 MT-ND5P03915 603 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 APEX1P27695 318 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 CD1CP29017 333 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 PSMD4P55036 377 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 OR2B6P58173 313 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 E2F1Q01094 437 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 TDGQ13569 410 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 ZSWIM7Q19AV6 140 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 AGAP6Q5VW22 663 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 ARHGAP11AQ6P4F7 1023 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 CMIPQ8IY22 773 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 OR52E2Q8NGJ4 325 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 AHCYL2Q96HN2 611 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 C4orf36Q96KX1 117 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 ZNF578Q96N58 590 aaPredicted RBP17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 AGAP4Q96P64 663 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 NDC1Q9BTX1 674 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 PHF7Q9BWX1 381 aaPredicted RBP17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 PDE7BQ9NP56 450 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 HAO2Q9NYQ3 351 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 TP53BP1Q12888 1972 aaPredicted RBP17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 A0A087WUJ7 227 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 TLCD2A6NGC4 264 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 EFCAB7A8K855 629 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 MCIDASD6RGH6 385 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 DYRK3O43781 588 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 HIST1H1CP16403 213 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 OR12D2P58182 307 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 DAB2P98082 770 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 ASAH1Q13510 395 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 KCNAB1Q14722 419 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 FAAH2Q6GMR7 532 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 ARL9Q6T311 187 aa17.01■□□□□ 0.31
PRPF40B-208ENST00000548436 SSX6Q7RTT6 188 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms