RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 RIBC1Q8N443 379 aaPredicted RBP10.53□□□□□ -0.72
TRAFD1-205ENST00000548277 OR5W2Q8NH69 310 aa10.53□□□□□ -0.72
TRAFD1-205ENST00000548277 TCP10LQ8TDR4 215 aa10.53□□□□□ -0.72
TRAFD1-205ENST00000548277 TWIST2Q8WVJ9 160 aa10.53□□□□□ -0.72
TRAFD1-205ENST00000548277 C3orf49Q96BT1 292 aa10.53□□□□□ -0.72
TRAFD1-205ENST00000548277 OR7D2Q96RA2 312 aa10.53□□□□□ -0.72
TRAFD1-205ENST00000548277 DHRS9Q9BPW9 319 aa10.53□□□□□ -0.72
TRAFD1-205ENST00000548277 C1orf50Q9BV19 199 aa10.53□□□□□ -0.72
TRAFD1-205ENST00000548277 SHARPINQ9H0F6 387 aa10.53□□□□□ -0.72
TRAFD1-205ENST00000548277 CHODLQ9H9P2 273 aa10.53□□□□□ -0.72
TRAFD1-205ENST00000548277 EML4Q9HC35 981 aaKnown RBP10.53□□□□□ -0.72
TRAFD1-205ENST00000548277 MKS1Q9NXB0 559 aa10.53□□□□□ -0.72
TRAFD1-205ENST00000548277 CDC42EP3Q9UKI2 254 aa10.53□□□□□ -0.72
TRAFD1-205ENST00000548277 NOSIPQ9Y314 301 aaKnown RBP10.53□□□□□ -0.72
TRAFD1-205ENST00000548277 ACTL7BQ9Y614 415 aa10.53□□□□□ -0.72
TRAFD1-205ENST00000548277 ESPNB1AK53 854 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 PIP5K1BO14986 540 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 SCAMP2O15127 329 aaKnown RBP10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 SLU7O95391 586 aaKnown RBP10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 PGM3O95394 542 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 C8BP07358 591 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 UBTFL6P0CB48 400 aaPredicted RBP10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 CREB1P16220 341 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 CD40P25942 277 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 NTF4P34130 210 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 RYKP34925 604 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 HPCAL1P37235 193 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 ASMTP46597 345 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 SUMO3P55854 103 aaPredicted RBP10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 SESN3P58005 492 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 LOXL1Q08397 574 aaPredicted RBP10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 CARTPTQ16568 116 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 C3orf33Q6P1S2 294 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 TMEM108Q6UXF1 575 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 TMPPEQ6ZT21 453 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 HMGN2P46Q86SG4 172 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 CCDC103Q8IW40 242 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 DEPDC4Q8N2C3 294 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 KRTCAP2Q8N6L1 136 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 OR52E4Q8NGH9 312 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 OR5P2Q8WZ92 322 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 ARL8AQ96BM9 186 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 MTERF3Q96E29 417 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 ZNF764Q96H86 408 aaPredicted RBP10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 SDF2Q99470 211 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 ROPN1BQ9BZX4 212 aaPredicted RBP10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 GRIP2Q9C0E4 1043 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 ROPN1Q9HAT0 212 aaPredicted RBP10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 SERINC1Q9NRX5 453 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 GPATCH2Q9NW75 528 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 LGALS13Q9UHV8 139 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 ATP6V1HQ9UI12 483 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 MKLN1Q9UL63 735 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 TMED5Q9Y3A6 229 aa10.52□□□□□ -0.73
TRAFD1-205ENST00000548277 CENPVL1A0A0U1RR11 272 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 SERINC4A6NH21 518 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 ZNF724A8MTY0 619 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 EIF4E2O60573 245 aaKnown RBP10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 LMX1BO60663 402 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 FCMRO60667 390 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 SKAP2O75563 359 aaPredicted RBP10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 CSTAP01040 98 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 DHRS4L1P0CG22 281 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 IGHV4-31P0DP07 118 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 MATN1P21941 496 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 DSCR9P59020 149 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 LSM11P83369 360 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 VLDLRP98155 873 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 GGTLC2Q14390 218 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 PTGR1Q14914 329 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 MLC1Q15049 377 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 PGS1Q32NB8 556 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 SLC25A53Q5H9E4 307 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 FBXW9Q5XUX1 488 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 KLHL17Q6TDP4 642 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 P2RY8Q86VZ1 359 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 HOMEZQ8IX15 550 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 OR56A1Q8NGH5 318 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 ZNF563Q8TA94 476 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 AENQ8WTP8 325 aaKnown RBP10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 APH1AQ96BI3 265 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 C19orf24Q9BVV8 132 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 CTPS2Q9NRF8 586 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 KCNE5Q9UJ90 142 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 MGAT4BQ9UQ53 548 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 SLC25A15Q9Y619 301 aa10.51□□□□□ -0.73
TRAFD1-205ENST00000548277 SLC35F4A4IF30 521 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 ELOA3DA6NLF2 546 aaPredicted RBP10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 TMEM114B3SHH9 223 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 NPIPB9F8W1W9 429 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 MRPL33O75394 65 aaKnown RBP10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 F12P00748 615 aaPredicted RBP10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 SLC25A16P16260 332 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 CDH2P19022 906 aaPredicted RBP10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 COX5AP20674 150 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 USF1P22415 310 aaPredicted RBP10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 PTAFRP25105 342 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 MAPK1P28482 360 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 ARRB2P32121 409 aa10.5□□□□□ -0.73
TRAFD1-205ENST00000548277 OR2B6P58173 313 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms