RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 CYTIPO60759 359 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 HRGP04196 525 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 NR2F1P10589 423 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 GPX2P18283 190 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 PPIBP23284 216 aaKnown RBP13.67□□□□□ -0.22
SSH1-204ENST00000546697 SFTPDP35247 375 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 CPA2P48052 419 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 FAM27E3Q08E93 113 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 EPS8Q12929 822 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 SYT14P1Q58G82 188 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 PAGE3Q5JUK9 113 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 SLC2A7Q6PXP3 512 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 TMPPEQ6ZT21 453 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 ADGRG3Q86Y34 549 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 PEX5LQ8IYB4 626 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 TMCO5AQ8N6Q1 288 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 ZNF610Q8N9Z0 462 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 WDR60Q8WVS4 1066 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 AURKBQ96GD4 344 aaPredicted RBP13.67□□□□□ -0.22
SSH1-204ENST00000546697 OPN3Q9H1Y3 402 aaPredicted RBP13.67□□□□□ -0.22
SSH1-204ENST00000546697 SERINC1Q9NRX5 453 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 CCDC167Q9P0B6 97 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 CHRNA9Q9UGM1 479 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 PROCRQ9UNN8 238 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 HDGFL3Q9Y3E1 203 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 SPIN1Q9Y657 262 aaPredicted RBP13.67□□□□□ -0.22
SSH1-204ENST00000546697 VPS13CQ709C8 3753 aa13.67□□□□□ -0.22
SSH1-204ENST00000546697 IGKV3D-15A0A087WSY6 115 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 ZNF724A8MTY0 619 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 FZD7O75084 574 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 ANP32DO95626 131 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 PMS2P2O95744 297 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 ETS2P15036 469 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 PPP3CBP16298 524 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 IL7RP16871 459 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 PSMB1P20618 241 aaKnown RBP13.66□□□□□ -0.22
SSH1-204ENST00000546697 ACAA2P42765 397 aaKnown RBP13.66□□□□□ -0.22
SSH1-204ENST00000546697 SLC1A3P43003 542 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 CRATP43155 626 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 RNF144AP50876 292 aaPredicted RBP13.66□□□□□ -0.22
SSH1-204ENST00000546697 H3F3AP84243 136 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 MERTKQ12866 999 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 SNTB1Q13884 538 aaKnown RBP13.66□□□□□ -0.22
SSH1-204ENST00000546697 LIN52Q52LA3 116 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 C6orf10Q5SRN2 563 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 MRPL2Q5T653 305 aaKnown RBP13.66□□□□□ -0.22
SSH1-204ENST00000546697 ABLIM2Q6H8Q1 611 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 DLEU7Q6UYE1 221 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 DNAJC14Q6Y2X3 702 aaPredicted RBP13.66□□□□□ -0.22
SSH1-204ENST00000546697 FCRLAQ7L513 359 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 LINC01560Q8TB33 94 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 PNPT1Q8TCS8 783 aaKnown RBP13.66□□□□□ -0.22
SSH1-204ENST00000546697 TMEM19Q96HH6 336 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 PSD2Q9BQI7 771 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 GPATCH1Q9BRR8 931 aaKnown RBP13.66□□□□□ -0.22
SSH1-204ENST00000546697 PRRG4Q9BZD6 226 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 CXXC4Q9H2H0 198 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 CLEC4MQ9H2X3 399 aaPredicted RBP13.66□□□□□ -0.22
SSH1-204ENST00000546697 TMEM38AQ9H6F2 299 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 PLEKHF2Q9H8W4 249 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 MRGBPQ9NV56 204 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 VAPAQ9P0L0 249 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 SLAMF8Q9P0V8 285 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 NDRG3Q9UGV2 375 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 TRAPPC4Q9Y296 219 aa13.66□□□□□ -0.22
SSH1-204ENST00000546697 ZNF469Q96JG9 3925 aaPredicted RBP13.65□□□□□ -0.22
SSH1-204ENST00000546697 CFAP73A6NFT4 308 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 C16orf97H3BN30 126 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 SMAD9O15198 467 aaKnown RBP13.65□□□□□ -0.22
SSH1-204ENST00000546697 PRKD3O94806 890 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 CNOT4O95628 575 aaKnown RBP13.65□□□□□ -0.22
SSH1-204ENST00000546697 OPN1LWP04000 364 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 ARAFP10398 606 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 CRYGSP22914 178 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 SLC7A1P30825 629 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 DNAJA1P31689 397 aaKnown RBP13.65□□□□□ -0.22
SSH1-204ENST00000546697 DIO1P49895 249 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 CCR4P51679 360 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 SLC16A1P53985 500 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 CSNK2A1P68400 391 aaPredicted RBP13.65□□□□□ -0.22
SSH1-204ENST00000546697 SIRPAP78324 504 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 TFAP2EQ6VUC0 442 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 STAC2Q6ZMT1 411 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 BEND4Q6ZU67 534 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 TMEM200AQ86VY9 491 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 CDC20BQ86Y33 519 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 GABRG1Q8N1C3 465 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 OR52P1PQ8NH57 321 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 RFWD2Q8NHY2 731 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 ABHD3Q8WU67 409 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 MBD6Q96DN6 1003 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 SPATA9Q9BWV2 254 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 RSPO3Q9BXY4 272 aaPredicted RBP13.65□□□□□ -0.22
SSH1-204ENST00000546697 POLDIP3Q9BY77 421 aaKnown RBP13.65□□□□□ -0.22
SSH1-204ENST00000546697 CTPS2Q9NRF8 586 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 KLHL9Q9P2J3 617 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 OSGIN1Q9UJX0 560 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 TRIM33Q9UPN9 1127 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 CORO2BQ9UQ03 480 aa13.65□□□□□ -0.22
SSH1-204ENST00000546697 IFT52Q9Y366 437 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms