RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-225	ENST00000545920	SAMD12	Q8N8I0	201 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	OR4F15	Q8NGB8	312 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	OR4M1	Q8NGD0	313 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	OR8H1	Q8NGG4	311 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	OR5D16	Q8NGK9	328 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	OR2A1	Q8NGT9	310 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	OR2T27	Q8NH04	317 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	OR4C6	Q8NH72	309 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	ABHD4	Q8TB40	342 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	TRMT10A	Q8TBZ6	339 aa	Known RBP	5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	FANK1	Q8TC84	345 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	RAB40A	Q8WXH6	277 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	NSMAF	Q92636	917 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	RSC1A1	Q92681	617 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	ARRDC3	Q96B67	414 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	PHF21A	Q96BD5	680 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	NXPE2	Q96DL1	559 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	CNRIP1	Q96F85	164 aa	Predicted RBP	5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	ZNF681	Q96N22	645 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	PRAP1	Q96NZ9	151 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	IL17F	Q96PD4	163 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	FCRL4	Q96PJ5	515 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	SORBS1	Q9BX66	1292 aa	Known RBP	5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	C1QTNF7	Q9BXJ2	289 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	CACNG6	Q9BXT2	260 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	RSPO3	Q9BXY4	272 aa	Predicted RBP	5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	ZNF350	Q9GZX5	532 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	OR52D1	Q9H346	318 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	KIR3DX1	Q9H7L2	352 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	ERVMER34-1	Q9H9K5	563 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	KCNK12	Q9HB15	430 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	GPN1	Q9HCN4	374 aa	Predicted RBP	5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	GP6	Q9HCN6	339 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	HINT3	Q9NQE9	182 aa	Known RBP	5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	NANS	Q9NR45	359 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	PHPT1	Q9NRX4	125 aa	Predicted RBP	5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	FAM86C1	Q9NVL1	165 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	SIDT1	Q9NXL6	827 aa	Known RBP	5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	PRR13	Q9NZ81	148 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	OR6C2	Q9NZP2	312 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	CYB5R1	Q9UHQ9	305 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	ZNF223	Q9UK11	482 aa	Predicted RBP	5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	TBX21	Q9UL17	535 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	ZFR2	Q9UPR6	939 aa	Known RBP	5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	CCL26	Q9Y258	94 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	RASD1	Q9Y272	281 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	YARS2	Q9Y2Z4	477 aa	Known RBP	5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	RWDD3	Q9Y3V2	267 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	WDR45	Q9Y484	360 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	MAB21L2	Q9Y586	359 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	ETV7	Q9Y603	341 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	CSNK1G3	Q9Y6M4	447 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	SESN1	Q9Y6P5	492 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	COLEC10	Q9Y6Z7	277 aa		5.99	□□□□□ -1.45
SNHG1-225	ENST00000545920	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920		A0A0G2JK05	382 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	LOC102723532	A0A0G2JNH3	316 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920		A0A0X1KG70	313 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920		A0A1W2PR48	441 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	BLACE	A4D250	179 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	CDHR4	A6H8M9	788 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	PRR19	A6NJB7	356 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	CD8B2	A6NJW9	211 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	CPSF4L	A6NMK7	179 aa	Known RBP	5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	GABARAP	H6UMI1	98 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	ERI3	O43414	337 aa	Known RBP	5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	PQBP1	O60828	265 aa	Known RBP	5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	DNAJB6	O75190	326 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	ZNF432	O94892	652 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	PAH	P00439	452 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	LALBA	P00709	142 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	GIP	P09681	153 aa	Predicted RBP	5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	SBK2	P0C263	348 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	CALCB	P10092	127 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	CD8B	P10966	210 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	LCN1	P31025	176 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	SSTR4	P31391	388 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	BTC	P35070	178 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	FAU	P35544	74 aa	Known RBP	5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	CCR9	P51686	369 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	PSMD4	P55036	377 aa	Known RBP	5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	SRP54	P61011	504 aa	Known RBP	5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	RAP2B	P61225	183 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	RAC1	P63000	192 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	GABRE	P78334	506 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	TNFRSF17	Q02223	184 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	SSBP1	Q04837	148 aa	Known RBP	5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	FZD5	Q13467	585 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	PDGFRL	Q15198	375 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	FCN2	Q15485	313 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	GSG1	Q2KHT4	349 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	ZNF791	Q3KP31	576 aa	Predicted RBP	5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	AMZ1	Q400G9	498 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	SLC36A2	Q495M3	483 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	PRRT3	Q5FWE3	981 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	FAM205BP	Q63HN1	556 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	B3GNTL1	Q67FW5	361 aa	Predicted RBP	5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	OLFML2A	Q68BL7	652 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	ZNF425	Q6IV72	752 aa		5.98	□□□□□ -1.45
SNHG1-225	ENST00000545920	SLC30A6	Q6NXT4	461 aa		5.98	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms