RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 STACQ99469 402 aa10.05□□□□□ -0.8
TMEM258-208ENST00000545210 BHLHE41Q9C0J9 482 aaPredicted RBP10.05□□□□□ -0.8
TMEM258-208ENST00000545210 HOXD1Q9GZZ0 328 aa10.05□□□□□ -0.8
TMEM258-208ENST00000545210 CDC42EP4Q9H3Q1 356 aaKnown RBP10.05□□□□□ -0.8
TMEM258-208ENST00000545210 PIGUQ9H490 435 aa10.05□□□□□ -0.8
TMEM258-208ENST00000545210 OCEL1Q9H607 264 aa10.05□□□□□ -0.8
TMEM258-208ENST00000545210 REEP4Q9H6H4 257 aa10.05□□□□□ -0.8
TMEM258-208ENST00000545210 RRAGDQ9NQL2 400 aaPredicted RBP10.05□□□□□ -0.8
TMEM258-208ENST00000545210 ACSS1Q9NUB1 689 aaPredicted RBP10.05□□□□□ -0.8
TMEM258-208ENST00000545210 ZCCHC3Q9NUD5 404 aaKnown RBP10.05□□□□□ -0.8
TMEM258-208ENST00000545210 MALT1Q9UDY8 824 aa10.05□□□□□ -0.8
TMEM258-208ENST00000545210 ZNF180Q9UJW8 692 aa10.05□□□□□ -0.8
TMEM258-208ENST00000545210 NPIPB8E9PQR5 432 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 ETV2O00321 342 aaPredicted RBP10.04□□□□□ -0.8
TMEM258-208ENST00000545210 ZNF264O43296 627 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 MRPL33O75394 65 aaKnown RBP10.04□□□□□ -0.8
TMEM258-208ENST00000545210 VENTXO95231 258 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 SLU7O95391 586 aaKnown RBP10.04□□□□□ -0.8
TMEM258-208ENST00000545210 SNRPAP09012 282 aaKnown RBP10.04□□□□□ -0.8
TMEM258-208ENST00000545210 FAM153BP0C7A2 387 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 UBL4AP11441 157 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 ATP12AP54707 1039 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 SNRPD2P62316 118 aaKnown RBP10.04□□□□□ -0.8
TMEM258-208ENST00000545210 CSNK2A1P68400 391 aaPredicted RBP10.04□□□□□ -0.8
TMEM258-208ENST00000545210 CBFBQ13951 182 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 PDK3Q15120 406 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 FAM153CQ494X1 144 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 DCST2Q5T1A1 773 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 TMPPEQ6ZT21 453 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 ZNF540Q8NDQ6 660 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 ARL8AQ96BM9 186 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 ZNF764Q96H86 408 aaPredicted RBP10.04□□□□□ -0.8
TMEM258-208ENST00000545210 TSSK3Q96PN8 268 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 THUMPD3Q9BV44 507 aaKnown RBP10.04□□□□□ -0.8
TMEM258-208ENST00000545210 TNFRSF12AQ9NP84 129 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 MYOZ1Q9NP98 299 aaPredicted RBP10.04□□□□□ -0.8
TMEM258-208ENST00000545210 SLC17A5Q9NRA2 495 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 SIRT3Q9NTG7 399 aaPredicted RBP10.04□□□□□ -0.8
TMEM258-208ENST00000545210 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.04□□□□□ -0.8
TMEM258-208ENST00000545210 BAIAP2L1Q9UHR4 511 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 DTNAQ9Y4J8 743 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 CCL27Q9Y4X3 112 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 PTGDR2Q9Y5Y4 395 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 KCNE3Q9Y6H6 103 aa10.04□□□□□ -0.8
TMEM258-208ENST00000545210 V9GYY5 206 aaPredicted RBP10.04□□□□□ -0.8
TMEM258-208ENST00000545210 NPIPB9F8W1W9 429 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 GPR171O14626 319 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 EIF4E2O60573 245 aaKnown RBP10.03□□□□□ -0.8
TMEM258-208ENST00000545210 TBX19O60806 448 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 CRCPO75575 148 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 CYP7B1O75881 506 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 GSTA1P08263 222 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 TFPIP10646 304 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 SDC1P18827 310 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 SERPINF1P36955 418 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 SESN3P58005 492 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 MERTKQ12866 999 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 PDE7AQ13946 482 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 SYT14P1Q58G82 188 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 PDZK1Q5T2W1 519 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 RINLQ6ZS11 566 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 SPATA19Q7Z5L4 167 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 RELL1Q8IUW5 271 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 CCDC103Q8IW40 242 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 C3orf56Q8N813 242 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 FMO2Q99518 471 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 CCT7Q99832 543 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 SERINC1Q9NRX5 453 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 C1orf109Q9NX04 203 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 METRNQ9UJH8 293 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 AMDHD2Q9Y303 409 aa10.03□□□□□ -0.8
TMEM258-208ENST00000545210 MGAM2Q2M2H8 2515 aa10.02□□□□□ -0.8
TMEM258-208ENST00000545210 PDLIM1O00151 329 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 APEX1P27695 318 aaKnown RBP10.02□□□□□ -0.81
TMEM258-208ENST00000545210 CHN2P52757 468 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 ACTG1P63261 375 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 SKP2Q13309 424 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 TP53BP2Q13625 1128 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 ZSWIM7Q19AV6 140 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 CLEC6AQ6EIG7 209 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 CASP12Q6UXS9 341 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 IFT20Q8IY31 132 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 C17orf78Q8N4C9 275 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 LINC01356Q8N9X3 169 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 SEMA6DQ8NFY4 1073 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 SGMS2Q8NHU3 365 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 PIGXQ8TBF5 258 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 ADAMTS15Q8TE58 950 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 ST8SIA1Q92185 356 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 ZMYND19Q96E35 227 aaPredicted RBP10.02□□□□□ -0.81
TMEM258-208ENST00000545210 ZHX1-C8orf76Q96EF9 292 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 METTL2AQ96IZ6 378 aaKnown RBP10.02□□□□□ -0.81
TMEM258-208ENST00000545210 ARL5BQ96KC2 179 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 SNX18Q96RF0 628 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 ACTRT3Q9BYD9 372 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 SLC7A10Q9NS82 523 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 CA10Q9NS85 328 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 UPB1Q9UBR1 384 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 DCTN4Q9UJW0 460 aa10.02□□□□□ -0.81
TMEM258-208ENST00000545210 FAF1Q9UNN5 650 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms