RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 SLC1A3P43003 542 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 YAP1P46937 504 aaKnown RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 PTDSS1P48651 473 aaKnown RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 HSPA13P48723 471 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 ZNF41P51814 821 aaPredicted RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 ARG2P78540 354 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 PIN1Q13526 163 aaPredicted RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 OR1C1Q15619 314 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 RFX4Q33E94 735 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 ALG10BQ5I7T1 473 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 FGD3Q5JSP0 725 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 OGFRL1Q5TC84 451 aaPredicted RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 HMBOX1Q6NT76 420 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 IGFL2Q6UWQ7 119 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 C5orf46Q6UWT4 87 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 LINC00696Q6ZRV3 163 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 ZBTB49Q6ZSB9 765 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 TSEN54Q7Z6J9 526 aaKnown RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 COMTD1Q86VU5 262 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 PLCZ1Q86YW0 608 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 RBM45Q8IUH3 476 aaKnown RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 LACC1Q8IV20 430 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 RNF113BQ8IZP6 322 aaKnown RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 CADM2Q8N3J6 435 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 TMEM178AQ8NBL3 297 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 FAM98AQ8NCA5 519 aaKnown RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 OR1J4Q8NGS1 313 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 GIPC3Q8TF64 312 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 ACOT11Q8WXI4 607 aaPredicted RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 SH3YL1Q96HL8 342 aaPredicted RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 RDH12Q96NR8 316 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 ALPK1Q96QP1 1244 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 RBM4BQ9BQ04 359 aaKnown RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 FAM173AQ9BQD7 235 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 PSD2Q9BQI7 771 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 RBM4Q9BWF3 364 aaKnown RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 RSPO3Q9BXY4 272 aaPredicted RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 GABARAPL1Q9H0R8 117 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 ZNF552Q9H707 407 aaPredicted RBP8.66□□□□□ -1.02
YBX3-215ENST00000544504 ZNF556Q9HAH1 456 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 NTN4Q9HB63 628 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 ACER3Q9NUN7 267 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 TAS2R10Q9NYW0 307 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 B4GALT7Q9UBV7 327 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 OAZ3Q9UMX2 235 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 NINQ8N4C6 2090 aa8.66□□□□□ -1.02
YBX3-215ENST00000544504 RP1L1Q8IWN7 2480 aaPredicted RBP8.65□□□□□ -1.02
YBX3-215ENST00000544504 DOCK10Q96BY6 2186 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 A0A0B4J2E0 115 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 A0A1B0GWA3 101 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 A0A1B0GX12 115 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 SAC3D1A6NKF1 404 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 ELOA3DA6NLF2 546 aaPredicted RBP8.65□□□□□ -1.02
YBX3-215ENST00000544504 KLRC4-KLRK1H3BQV0 150 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 J3KTA2 159 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 FFAR1O14842 300 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 SNPHO15079 494 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 CBR3O75828 277 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 NEURL1O76050 574 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 CCL3P10147 92 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 PRG2P13727 222 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 RYKP34925 604 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 PTGDSP41222 190 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 IDH2P48735 452 aaKnown RBP8.65□□□□□ -1.02
YBX3-215ENST00000544504 RAD23AP54725 363 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 DLX5P56178 289 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 MICAQ29983 383 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.65□□□□□ -1.02
YBX3-215ENST00000544504 EIF2S3LQ2VIR3 472 aaKnown RBP8.65□□□□□ -1.02
YBX3-215ENST00000544504 ELOA3BQ3SY89 546 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 GLYR1Q49A26 553 aaPredicted RBP8.65□□□□□ -1.02
YBX3-215ENST00000544504 TIGD3Q6B0B8 471 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 DESI1Q6ICB0 168 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 SLC25A25Q6KCM7 469 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 PPP4R4Q6NUP7 873 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 GRINAQ7Z429 371 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 GDF7Q7Z4P5 450 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 STK32CQ86UX6 486 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 CDK20Q8IZL9 346 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 ZADH2Q8N4Q0 377 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 AMER2Q8N7J2 671 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 FADS6Q8N9I5 356 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 FDCSPQ8NFU4 85 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 ELOA3Q8NG57 546 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 OR2M3Q8NG83 312 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 RNF217Q8TC41 542 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 GPR119Q8TDV5 335 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 ZBTB8AQ96BR9 441 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 NTNG2Q96CW9 530 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 MRGPRX4Q96LA9 322 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 SMAD5Q99717 465 aaKnown RBP8.65□□□□□ -1.02
YBX3-215ENST00000544504 CIB1Q99828 191 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 SLC19A3Q9BZV2 496 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.65□□□□□ -1.02
YBX3-215ENST00000544504 GALNT9Q9HCQ5 603 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 PDP1Q9P0J1 537 aaPredicted RBP8.65□□□□□ -1.02
YBX3-215ENST00000544504 KIF17Q9P2E2 1029 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 MGAT4BQ9UQ53 548 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 TMEM5Q9Y2B1 443 aa8.65□□□□□ -1.02
YBX3-215ENST00000544504 SPIN1Q9Y657 262 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms