RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 OR51E2Q9H255 320 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 MCCC2Q9HCC0 563 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 ZNF346Q9UL40 294 aaKnown RBP12.5□□□□□ -0.41
HCFC2-202ENST00000544223 PTRH2Q9Y3E5 179 aaKnown RBP12.5□□□□□ -0.41
HCFC2-202ENST00000544223 COL27A1Q8IZC6 1860 aaPredicted RBP12.5□□□□□ -0.41
HCFC2-202ENST00000544223 A0A1W2PNU3 283 aaPredicted RBP12.5□□□□□ -0.41
HCFC2-202ENST00000544223 NDUFB5O43674 189 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 CPNE3O75131 537 aaKnown RBP12.5□□□□□ -0.41
HCFC2-202ENST00000544223 MRPL3P09001 348 aaKnown RBP12.5□□□□□ -0.41
HCFC2-202ENST00000544223 CD59P13987 128 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 KLHL12Q53G59 568 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 CPEB2Q7Z5Q1 589 aaKnown RBP12.5□□□□□ -0.41
HCFC2-202ENST00000544223 ERI1Q8IV48 349 aaKnown RBP12.5□□□□□ -0.41
HCFC2-202ENST00000544223 FAM26EQ8N5C1 309 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 LSMEM1Q8N8F7 131 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 ZNF441Q8N8Z8 693 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 OSTF1Q92882 214 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 KTI12Q96EK9 354 aaPredicted RBP12.5□□□□□ -0.41
HCFC2-202ENST00000544223 PLEKHA8Q96JA3 519 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 TBL1XR1Q9BZK7 514 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 CCNB1IP1Q9NPC3 277 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 KLHL1Q9NR64 748 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 ENPP5Q9UJA9 477 aa12.5□□□□□ -0.41
HCFC2-202ENST00000544223 CACNA1CQ13936 2221 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 SAGE2PA6NJ88 616 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 VSTM2BA6NLU5 285 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 MCIDASD6RGH6 385 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 BLOC1S5-TXNDC5H3BN57 136 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 BHLHE40O14503 412 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 FMO6PO60774 539 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 OR2J2O76002 312 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 OPN1LWP04000 364 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 UMODP07911 640 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 FGF5P12034 268 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 TACR3P29371 465 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 DUSP3P51452 185 aaPredicted RBP12.49□□□□□ -0.41
HCFC2-202ENST00000544223 FOXK1P85037 733 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 EGR4Q05215 589 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 TSTQ16762 297 aaKnown RBP12.49□□□□□ -0.41
HCFC2-202ENST00000544223 YOD1Q5VVQ6 348 aaPredicted RBP12.49□□□□□ -0.41
HCFC2-202ENST00000544223 OTPQ5XKR4 325 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 AP1ARQ63HQ0 302 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 ZNF550Q7Z398 422 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 ZNF527Q8NB42 609 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 OR9Q1Q8NGQ5 310 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 ZPLD1Q8TCW7 415 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 ZNF426Q9BUY5 554 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 OR51V1Q9H2C8 321 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 PISDQ9UG56 409 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 DMXL2Q8TDJ6 3036 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 CPAMD8Q8IZJ3 1885 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 HBQ1P09105 142 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 EVI2BP34910 448 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 HCCSP53701 268 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 PLA2G2CQ5R387 149 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 UBE2UQ5VVX9 321 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 MRPL14Q6P1L8 145 aaKnown RBP12.49□□□□□ -0.41
HCFC2-202ENST00000544223 LINC00114Q6XXX2 140 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 P2RY8Q86VZ1 359 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 SVOPQ8N4V2 548 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 MOSPD2Q8NHP6 518 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 NPFFR2Q9Y5X5 522 aa12.49□□□□□ -0.41
HCFC2-202ENST00000544223 A0A087WUJ7 227 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 ELOA3DA6NLF2 546 aaPredicted RBP12.48□□□□□ -0.41
HCFC2-202ENST00000544223 FAM171A2A8MVW0 826 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 MPZL2O60487 215 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 CSO75390 466 aaKnown RBP12.48□□□□□ -0.41
HCFC2-202ENST00000544223 KLF7O75840 302 aaPredicted RBP12.48□□□□□ -0.41
HCFC2-202ENST00000544223 RPS5P46782 204 aaKnown RBP12.48□□□□□ -0.41
HCFC2-202ENST00000544223 GAS1P54826 345 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 TMBIM6P55061 237 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 CDH11P55287 796 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 FOXK2Q01167 660 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 IRF3Q14653 427 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 BTBD16Q32M84 506 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 ELOA3BQ3SY89 546 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 LYPD4Q6UWN0 246 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 CDK20Q8IZL9 346 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 SIRT6Q8N6T7 355 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 CLDN22Q8N7P3 220 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 SDR9C7Q8NEX9 313 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 ELOA3Q8NG57 546 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 OR51G2Q8NGK0 314 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 OR4K13Q8NH42 304 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 ZNRF4Q8WWF5 429 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 GATAD2BQ8WXI9 593 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 TMEM203Q969S6 136 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 ART5Q96L15 291 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 SLC38A2Q96QD8 506 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 LPAR4Q99677 370 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 CHCHD6Q9BRQ6 235 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 YARS2Q9Y2Z4 477 aaKnown RBP12.48□□□□□ -0.41
HCFC2-202ENST00000544223 EXPH5Q8NEV8 1989 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 A0A1B0GVG6 124 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 SH3D21A4FU49 640 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 EFCAB10A6NFE3 127 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 NOL3O60936 208 aaKnown RBP12.48□□□□□ -0.41
HCFC2-202ENST00000544223 PTP4A3O75365 173 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 F13BP05160 661 aa12.48□□□□□ -0.41
HCFC2-202ENST00000544223 BMP7P18075 431 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms