RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 CCDC106Q9BWC9 280 aa20.78■□□□□ 0.92
CHFR-222ENST00000544093 SRXN1Q9BYN0 137 aa20.78■□□□□ 0.92
CHFR-222ENST00000544093 PAIP1Q9H074 479 aaKnown RBP20.78■□□□□ 0.92
CHFR-222ENST00000544093 ARMC7Q9H6L4 198 aa20.78■□□□□ 0.92
CHFR-222ENST00000544093 CCDC167Q9P0B6 97 aa20.78■□□□□ 0.92
CHFR-222ENST00000544093 KLHL9Q9P2J3 617 aa20.78■□□□□ 0.92
CHFR-222ENST00000544093 KLHL13Q9P2N7 655 aa20.78■□□□□ 0.92
CHFR-222ENST00000544093 CHRNA9Q9UGM1 479 aa20.78■□□□□ 0.92
CHFR-222ENST00000544093 CLEC4AQ9UMR7 237 aa20.78■□□□□ 0.92
CHFR-222ENST00000544093 TRIM33Q9UPN9 1127 aa20.78■□□□□ 0.92
CHFR-222ENST00000544093 PCDHB14Q9Y5E9 798 aa20.78■□□□□ 0.92
CHFR-222ENST00000544093 DSPPQ9NZW4 1301 aa20.78■□□□□ 0.92
CHFR-222ENST00000544093 CLIC1O00299 241 aa20.77■□□□□ 0.92
CHFR-222ENST00000544093 SASH3O75995 380 aa20.77■□□□□ 0.92
CHFR-222ENST00000544093 PPP3CBP16298 524 aa20.77■□□□□ 0.92
CHFR-222ENST00000544093 RYKP34925 604 aa20.77■□□□□ 0.92
CHFR-222ENST00000544093 LIN52Q52LA3 116 aa20.77■□□□□ 0.92
CHFR-222ENST00000544093 SYT14P1Q58G82 188 aa20.77■□□□□ 0.92
CHFR-222ENST00000544093 LRIF1Q5T3J3 769 aa20.77■□□□□ 0.92
CHFR-222ENST00000544093 PRAMEF8Q5VWM4 474 aa20.77■□□□□ 0.92
CHFR-222ENST00000544093 PRAMEF7Q5VXH5 474 aa20.77■□□□□ 0.92
CHFR-222ENST00000544093 SLC2A7Q6PXP3 512 aa20.77■□□□□ 0.92
CHFR-222ENST00000544093 CDC20BQ86Y33 519 aa20.77■□□□□ 0.92
CHFR-222ENST00000544093 SLC38A5Q8WUX1 472 aa20.77■□□□□ 0.92
CHFR-222ENST00000544093 ROBO4Q8WZ75 1007 aa20.77■□□□□ 0.92
CHFR-222ENST00000544093 OR5B2Q96R09 309 aa20.77■□□□□ 0.92
CHFR-222ENST00000544093 A0A0G2JPF8 293 aa20.76■□□□□ 0.91
CHFR-222ENST00000544093 HNRNPCL2B2RXH8 293 aa20.76■□□□□ 0.91
CHFR-222ENST00000544093 HNRNPCL3B7ZW38 293 aa20.76■□□□□ 0.91
CHFR-222ENST00000544093 HNRNPCL1O60812 293 aaKnown RBP20.76■□□□□ 0.91
CHFR-222ENST00000544093 BCHEP06276 602 aa20.76■□□□□ 0.91
CHFR-222ENST00000544093 THBS1P07996 1170 aa20.76■□□□□ 0.91
CHFR-222ENST00000544093 HNRNPCL4P0DMR1 293 aa20.76■□□□□ 0.91
CHFR-222ENST00000544093 ENPP1P22413 925 aa20.76■□□□□ 0.91
CHFR-222ENST00000544093 DNAJA1P31689 397 aaKnown RBP20.76■□□□□ 0.91
CHFR-222ENST00000544093 LARS2Q15031 903 aaKnown RBP20.76■□□□□ 0.91
CHFR-222ENST00000544093 RGNQ15493 299 aa20.76■□□□□ 0.91
CHFR-222ENST00000544093 FUNDC1Q8IVP5 155 aa20.76■□□□□ 0.91
CHFR-222ENST00000544093 ABHD3Q8WU67 409 aa20.76■□□□□ 0.91
CHFR-222ENST00000544093 CNOT9Q92600 299 aaKnown RBP20.76■□□□□ 0.91
CHFR-222ENST00000544093 AURKBQ96GD4 344 aaPredicted RBP20.76■□□□□ 0.91
CHFR-222ENST00000544093 MED18Q9BUE0 208 aa20.76■□□□□ 0.91
CHFR-222ENST00000544093 ITGB1BP2Q9UKP3 347 aa20.76■□□□□ 0.91
CHFR-222ENST00000544093 ZNF232Q9UNY5 417 aa20.76■□□□□ 0.91
CHFR-222ENST00000544093 CORO2BQ9UQ03 480 aa20.76■□□□□ 0.91
CHFR-222ENST00000544093 HDGFL3Q9Y3E1 203 aa20.76■□□□□ 0.91
CHFR-222ENST00000544093 CDHR4A6H8M9 788 aa20.75■□□□□ 0.91
CHFR-222ENST00000544093 CFAP73A6NFT4 308 aa20.75■□□□□ 0.91
CHFR-222ENST00000544093 CLDN24A6NM45 220 aa20.75■□□□□ 0.91
CHFR-222ENST00000544093 NR5A2O00482 541 aa20.75■□□□□ 0.91
CHFR-222ENST00000544093 DNPH1O43598 174 aa20.75■□□□□ 0.91
CHFR-222ENST00000544093 EDF1O60869 148 aaKnown RBP20.75■□□□□ 0.91
CHFR-222ENST00000544093 BCAS1O75363 584 aaPredicted RBP20.75■□□□□ 0.91
CHFR-222ENST00000544093 YES1P07947 543 aa20.75■□□□□ 0.91
CHFR-222ENST00000544093 BMP2P12643 396 aa20.75■□□□□ 0.91
CHFR-222ENST00000544093 IDH2P48735 452 aaKnown RBP20.75■□□□□ 0.91
CHFR-222ENST00000544093 MAPK11Q15759 364 aa20.75■□□□□ 0.91
CHFR-222ENST00000544093 GTDC1Q4AE62 458 aa20.75■□□□□ 0.91
CHFR-222ENST00000544093 MRPL2Q5T653 305 aaKnown RBP20.75■□□□□ 0.91
CHFR-222ENST00000544093 TMPPEQ6ZT21 453 aa20.75■□□□□ 0.91
CHFR-222ENST00000544093 HMGN2P46Q86SG4 172 aa20.75■□□□□ 0.91
CHFR-222ENST00000544093 OR52P1PQ8NH57 321 aa20.75■□□□□ 0.91
CHFR-222ENST00000544093 ZHX1-C8orf76Q96EF9 292 aa20.75■□□□□ 0.91
CHFR-222ENST00000544093 OR10A4Q9H209 315 aa20.75■□□□□ 0.91
CHFR-222ENST00000544093 A4GALTQ9NPC4 353 aa20.75■□□□□ 0.91
CHFR-222ENST00000544093 IFT52Q9Y366 437 aa20.75■□□□□ 0.91
CHFR-222ENST00000544093 GMEB1Q9Y692 573 aa20.75■□□□□ 0.91
CHFR-222ENST00000544093 AKAP6Q13023 2319 aa20.75■□□□□ 0.91
CHFR-222ENST00000544093 A0A1W2PNR3 127 aa20.74■□□□□ 0.91
CHFR-222ENST00000544093 SULT2B1O00204 365 aa20.74■□□□□ 0.91
CHFR-222ENST00000544093 HOXB9P17482 250 aaPredicted RBP20.74■□□□□ 0.91
CHFR-222ENST00000544093 SLC1A3P43003 542 aa20.74■□□□□ 0.91
CHFR-222ENST00000544093 DIO1P49895 249 aa20.74■□□□□ 0.91
CHFR-222ENST00000544093 PLAURQ03405 335 aa20.74■□□□□ 0.91
CHFR-222ENST00000544093 EXOC3L2Q2M3D2 409 aa20.74■□□□□ 0.91
CHFR-222ENST00000544093 AGKQ53H12 422 aa20.74■□□□□ 0.91
CHFR-222ENST00000544093 RNF220Q5VTB9 566 aa20.74■□□□□ 0.91
CHFR-222ENST00000544093 TMEM19Q96HH6 336 aa20.74■□□□□ 0.91
CHFR-222ENST00000544093 WFIKKN1Q96NZ8 548 aa20.74■□□□□ 0.91
CHFR-222ENST00000544093 BCO1Q9HAY6 547 aa20.74■□□□□ 0.91
CHFR-222ENST00000544093 BCL2L10Q9HD36 194 aa20.74■□□□□ 0.91
CHFR-222ENST00000544093 CTPS2Q9NRF8 586 aa20.74■□□□□ 0.91
CHFR-222ENST00000544093 MRGBPQ9NV56 204 aa20.74■□□□□ 0.91
CHFR-222ENST00000544093 ST6GALNAC2Q9UJ37 374 aa20.74■□□□□ 0.91
CHFR-222ENST00000544093 A0A1W2PP18 115 aa20.73■□□□□ 0.91
CHFR-222ENST00000544093 ZNF208O43345 1280 aa20.73■□□□□ 0.91
CHFR-222ENST00000544093 CYTIPO60759 359 aa20.73■□□□□ 0.91
CHFR-222ENST00000544093 HRGP04196 525 aa20.73■□□□□ 0.91
CHFR-222ENST00000544093 TFPIP10646 304 aa20.73■□□□□ 0.91
CHFR-222ENST00000544093 CCKARP32238 428 aa20.73■□□□□ 0.91
CHFR-222ENST00000544093 POLR2HP52434 150 aaKnown RBP20.73■□□□□ 0.91
CHFR-222ENST00000544093 EPS8Q12929 822 aa20.73■□□□□ 0.91
CHFR-222ENST00000544093 METTL21CQ5VZV1 264 aa20.73■□□□□ 0.91
CHFR-222ENST00000544093 ZNF550Q7Z398 422 aa20.73■□□□□ 0.91
CHFR-222ENST00000544093 TUSC5Q8IXB3 177 aa20.73■□□□□ 0.91
CHFR-222ENST00000544093 KLHL4Q9C0H6 718 aa20.73■□□□□ 0.91
CHFR-222ENST00000544093 KLHL28Q9NXS3 571 aa20.73■□□□□ 0.91
CHFR-222ENST00000544093 CELSR1Q9NYQ6 3014 aa20.73■□□□□ 0.91
CHFR-222ENST00000544093 C5orf58C9J3I9 102 aa20.72■□□□□ 0.91
CHFR-222ENST00000544093 PMS2P2O95744 297 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms