RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 DUSP26Q9BV47 211 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 NUDT9Q9BW91 350 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 SEMA4CQ9C0C4 833 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 TINAGL1Q9GZM7 467 aaPredicted RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 NSRP1Q9H0G5 558 aaKnown RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 C11orf54Q9H0W9 315 aaPredicted RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 GLIPR2Q9H4G4 154 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 CDCP1Q9H5V8 836 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 GORASP2Q9H8Y8 452 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 NGBQ9NPG2 151 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ACSS1Q9NUB1 689 aaPredicted RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 SMPD3Q9NY59 655 aaPredicted RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 STMN3Q9NZ72 180 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ABI3Q9P2A4 366 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 BCAP29Q9UHQ4 241 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 TEX13CA0A0J9YWL9 993 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 C2orf92A0A1B0GVN3 265 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 A0A1W2PRB8 838 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 GMNCA6NCL1 334 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 CYTIPO60759 359 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 PAGE4O60829 102 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 IGKV3-11P04433 115 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 CT62P0C5K7 136 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 LYL1P12980 280 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 TNFRSF1AP19438 455 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 EFNA1P20827 205 aaPredicted RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 S100A3P33764 101 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 PTTG1IPP53801 180 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 SLC37A1P57057 533 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 RAC3P60763 192 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 IRX1P78414 480 aaPredicted RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ARG2P78540 354 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 FUT7Q11130 342 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 MFAP5Q13361 173 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 EXOSC7Q15024 291 aaKnown RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 FAM174BQ3ZCQ3 159 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 TRMT12Q53H54 448 aaKnown RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 LACTB2Q53H82 288 aaPredicted RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ACER2Q5QJU3 275 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ANXA8L1Q5VT79 327 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 B3GNTL1Q67FW5 361 aaPredicted RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 FCRLBQ6BAA4 426 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 HEPHL1Q6MZM0 1159 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 TCTN3Q6NUS6 607 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 TMEM107Q6UX40 140 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 SEM1Q6ZVN7 128 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ASB18Q6ZVZ8 466 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ZNF551Q7Z340 670 aaPredicted RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 CAMKMTQ7Z624 323 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 RPS19BP1Q86WX3 136 aaKnown RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ZADH2Q8N4Q0 377 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 OR52R1Q8NGF1 315 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 OR8K3Q8NH51 312 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 SUN3Q8TAQ9 357 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 WBP1Q96G27 269 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 LMF1Q96S06 567 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 FAM107BQ9H098 131 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 OR10A5Q9H207 317 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 CLMPQ9H6B4 373 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 RPRD1BQ9NQG5 326 aaKnown RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 ZNF71Q9NQZ8 489 aaPredicted RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 SDR39U1Q9NRG7 319 aaPredicted RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 MAT2BQ9NZL9 334 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 PRODH2Q9UF12 536 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 SLC23A1Q9UHI7 598 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 CFL2Q9Y281 166 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 TP53TG5Q9Y2B4 290 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 STRAPQ9Y3F4 350 aaKnown RBP4.68□□□□□ -1.66
CLIP1-217ENST00000543205 PCSK5Q92824 1860 aa4.68□□□□□ -1.66
CLIP1-217ENST00000543205 SCN2AQ99250 2005 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 XKRY2A2RUG3 117 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 FAM90A8PA6NJQ4 464 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 WWP2O00308 870 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 SLC33A1O00400 549 aaPredicted RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 ANKRD28O15084 1053 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 PRKNO60260 465 aaPredicted RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 DPM1O60762 260 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 PRAMEF2O60811 474 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 MTRF1O75570 445 aaKnown RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 RASAL1O95294 804 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 C6orf47O95873 294 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 AK1P00568 194 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 IL6P05231 212 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 FAM90A13PP0C7W8 464 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 FAM90A24PP0C7X0 464 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 FAHP16930 419 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 S1PR1P21453 382 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 IL12AP29459 219 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 CASRP41180 1078 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 MC3RP41968 323 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 FRKP42685 505 aaPredicted RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 ATP4BP51164 291 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 SSR4P51571 173 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 POLR2JP52435 117 aaKnown RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 KCNK10P57789 538 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 MLF1P58340 268 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 CD83Q01151 205 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 RELQ04864 619 aaPredicted RBP4.67□□□□□ -1.66
CLIP1-217ENST00000543205 IL24Q13007 206 aa4.67□□□□□ -1.66
CLIP1-217ENST00000543205 LY6DQ14210 128 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms