RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 HIPK4Q8NE63 616 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 SVIPQ8NHG7 77 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 POC1BQ8TC44 478 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 DNAJA3Q96EY1 480 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 CERS2Q96G23 380 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 CFAP36Q96G28 342 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 HRASLS5Q96KN8 279 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 PSD2Q9BQI7 771 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 ZNF717Q9BY31 904 aaPredicted RBP4.13□□□□□ -1.75
LIMS1-214ENST00000542845 MRPL1Q9BYD6 325 aaKnown RBP4.13□□□□□ -1.75
LIMS1-214ENST00000542845 XAB2Q9HCS7 855 aaKnown RBP4.13□□□□□ -1.75
LIMS1-214ENST00000542845 SLC52A3Q9NQ40 469 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 CA10Q9NS85 328 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 ACSS1Q9NUB1 689 aaPredicted RBP4.13□□□□□ -1.75
LIMS1-214ENST00000542845 ASB6Q9NWX5 421 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 TAS2R9Q9NYW1 312 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 KLHL9Q9P2J3 617 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 CES1P1Q9UKY3 287 aa4.13□□□□□ -1.75
LIMS1-214ENST00000542845 A0A087WZY1 265 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 A0A0G2JMP0 313 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 A0A0X1KG70 313 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 A0A1W2PRB8 838 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 SUPT3HB4E1H0 165 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 K7EPI3 171 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 FOXE1O00358 373 aaPredicted RBP4.12□□□□□ -1.75
LIMS1-214ENST00000542845 ZNF195O14628 629 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 PLPP2O43688 288 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 EFNA2O43921 213 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 GUCY1B2O75343 617 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 SUPT3HO75486 399 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 TSPAN15O95858 294 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 GPANK1O95872 356 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 CRYAAP02489 173 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 TFP02787 698 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 CRYBA1P05813 215 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 CTAGE8P0CG41 777 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 ANPEPP15144 967 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 PGAM1P18669 254 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 COX5AP20674 150 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 SLC7A1P30825 629 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 PPOXP50336 477 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 SLC25A3Q00325 362 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 MVKQ03426 396 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 SLC18A2Q05940 514 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 CUL3Q13618 768 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 OR4D1Q15615 310 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 PLPPR5Q32ZL2 321 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 GRAMD1BQ3KR37 738 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 CT83Q5H943 113 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 SPANXN3Q5MJ09 141 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 MROH9Q5TGP6 573 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 ASPHD2Q6ICH7 369 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 OR7E24Q6IFN5 339 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 ACSM5Q6NUN0 579 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 CAVIN1Q6NZI2 390 aaKnown RBP4.12□□□□□ -1.75
LIMS1-214ENST00000542845 KLHL24Q6TFL4 600 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 PAGE2Q7Z2X7 111 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 GALNT5Q7Z7M9 940 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 TRABD2AQ86V40 505 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 KRTAP19-1Q8IUB9 90 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 VSTM4Q8IW00 320 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 CTAGE4Q8IX94 777 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 CCDC170Q8IYT3 715 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 BCL6BQ8N143 479 aaPredicted RBP4.12□□□□□ -1.75
LIMS1-214ENST00000542845 SLC43A2Q8N370 569 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 WDR31Q8NA23 367 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 OR4M2Q8NGB6 313 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 OR52E4Q8NGH9 312 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 OR9A2Q8NGT5 310 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 CEP70Q8NHQ1 597 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 RNF138Q8WVD3 245 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 JADE3Q92613 823 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 EXOSC8Q96B26 276 aaKnown RBP4.12□□□□□ -1.75
LIMS1-214ENST00000542845 APH1AQ96BI3 265 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 LRRC58Q96CX6 371 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 CNRIP1Q96F85 164 aaPredicted RBP4.12□□□□□ -1.75
LIMS1-214ENST00000542845 HES6Q96HZ4 224 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 MAP6Q96JE9 813 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 VSTM2LQ96N03 204 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 KLHDC3Q9BQ90 382 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 PLK3Q9H4B4 646 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 ZMAT4Q9H898 229 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 CAB39LQ9H9S4 337 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 PPCSQ9HAB8 311 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 BEX1Q9HBH7 125 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 TCF7L1Q9HCS4 588 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 SAYSD1Q9NPB0 183 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 G6PC2Q9NQR9 355 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 SLC17A5Q9NRA2 495 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 MED17Q9NVC6 651 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 FAM120CQ9NX05 1096 aaKnown RBP4.12□□□□□ -1.75
LIMS1-214ENST00000542845 TAS2R16Q9NYV7 291 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 AHSPQ9NZD4 102 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 SLAMF8Q9P0V8 285 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 UPB1Q9UBR1 384 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 MRTO4Q9UKD2 239 aaKnown RBP4.12□□□□□ -1.75
LIMS1-214ENST00000542845 UTS2RQ9UKP6 389 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 ABCG2Q9UNQ0 655 aa4.12□□□□□ -1.75
LIMS1-214ENST00000542845 NOSIPQ9Y314 301 aaKnown RBP4.12□□□□□ -1.75
LIMS1-214ENST00000542845 RNF11Q9Y3C5 154 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms