RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 C1orf61Q13536 156 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 TMEM187Q14656 261 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 RAB35Q15286 201 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 TEAD2Q15562 447 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 PIP5KL1Q5T9C9 394 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 PRR5LQ6MZQ0 368 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 UQCC3Q6UW78 93 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 MOB2Q70IA6 237 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 CYS1Q717R9 158 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 PTAR1Q7Z6K3 402 aaPredicted RBP3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 LUZP2Q86TE4 346 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 KATNAL2Q8IYT4 538 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 RAB42Q8N4Z0 105 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 ZSCAN4Q8NAM6 433 aaPredicted RBP3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 TRPV1Q8NER1 839 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 OR5L2Q8NGL0 311 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 SCARB1Q8WTV0 552 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 TSEN15Q8WW01 171 aaKnown RBP3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 SLCO2A1Q92959 643 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 BIRC7Q96CA5 298 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 HAVCR1Q96D42 359 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 ZNF479Q96JC4 524 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 TSNARE1Q96NA8 513 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 RHOXF2Q9BQY4 288 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 TMEM204Q9BSN7 226 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 TRIM62Q9BVG3 475 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 C1QTNF4Q9BXJ3 329 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 DUSP16Q9BY84 665 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 STMN4Q9H169 189 aaPredicted RBP3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 GLT8D2Q9H1C3 349 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 IL36GQ9NZH8 169 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 RNF7Q9UBF6 113 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 TRAF3IP3Q9Y228 551 aa3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 MRPS18CQ9Y3D5 142 aaKnown RBP3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 BRCA1P38398 1863 aaKnown RBP3.33□□□□□ -1.88
SFSWAP-211ENST00000542813 MYH14Q7Z406 1995 aaKnown RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 IGHV4-4A0A075B6R2 117 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 LINC00854A0A1B0GVQ3 168 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 DNAJC9-AS1A6NH13 148 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 SUPT3HB4E1H0 165 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 C9JVG2 144 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 NPIPB9F8W1W9 429 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 HAS3O00219 553 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 LSM1O15116 133 aaKnown RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 POLR2DO15514 142 aaKnown RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 CEACAM4O75871 244 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 CLDN9O95484 217 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 OTCP00480 354 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 CST1P01037 141 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 SP1P08047 785 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 NGFRP08138 427 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 HBQ1P09105 142 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 MCF2P10911 925 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 TNNI1P19237 187 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 ATP5A1P25705 553 aaKnown RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 HNRNPH3P31942 346 aaKnown RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 EPHX2P34913 555 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 UGT1A5P35504 534 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 RPL13AP40429 203 aaKnown RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 TSFMP43897 325 aaKnown RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 CDKN1BP46527 198 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 NOVA1P51513 510 aaKnown RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 SLC7A2P52569 658 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 CDH6P55285 790 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 RGS8P57771 180 aaPredicted RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 OTUD4Q01804 1114 aaKnown RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 DHODHQ02127 395 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 OGDHQ02218 1023 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 PLOD1Q02809 727 aaPredicted RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 ZNF85Q03923 595 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 MERTKQ12866 999 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 DNAJC3Q13217 504 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 CD226Q15762 336 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 ECSCRQ19T08 205 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 KNOP1Q1ED39 458 aaKnown RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 SLC5A12Q1EHB4 618 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 ALKBH6Q3KRA9 238 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 BEND3Q5T5X7 828 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 WDR25Q64LD2 544 aaPredicted RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 ADAMTSL5Q6ZMM2 481 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 C9orf47Q6ZRZ4 202 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 APTXQ7Z2E3 356 aaKnown RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 HOGA1Q86XE5 327 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 CATSPERDQ86XM0 798 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 LSMEM2Q8N112 164 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 CIARTQ8N365 385 aaPredicted RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 DHRSXQ8N5I4 330 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 OR4C5Q8NGB2 326 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 OR10A7Q8NGE5 316 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 PCNPQ8WW12 178 aaKnown RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 MAIP1Q8WWC4 291 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 BADQ92934 168 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 TM4SF19Q96DZ7 209 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 MED30Q96HR3 178 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 TECTBQ96PL2 329 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 CCT8L2Q96SF2 557 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 CENPKQ9BS16 269 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 IKZF5Q9H5V7 419 aa3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 C6orf106Q9H6K1 298 aaPredicted RBP3.32□□□□□ -1.88
SFSWAP-211ENST00000542813 GEMIN7Q9H840 131 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms