RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 SC5DO75845 299 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 THEGLP0DJG4 465 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 SLC2A2P11168 524 aaPredicted RBP6.03□□□□□ -1.44
PTPRO-208ENST00000542557 CTSEP14091 401 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 IL9P15248 144 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 LTBRP36941 435 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 MAP2K3P46734 347 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 CRMP1Q14194 572 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 GGTLC2Q14390 218 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.03□□□□□ -1.44
PTPRO-208ENST00000542557 KLHL12Q53G59 568 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 ALG10BQ5I7T1 473 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 ATAD3CQ5T2N8 411 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 TRIQKQ629K1 86 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 ULK3Q6PHR2 472 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 C1orf122Q6ZSJ8 110 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 OAFQ86UD1 273 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 TPRA1Q86W33 373 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 PARGQ86W56 976 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 MCATQ8IVS2 390 aaKnown RBP6.03□□□□□ -1.44
PTPRO-208ENST00000542557 SFTPA2Q8IWL1 248 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 SIX5Q8N196 739 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 Q8N402 240 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 DNAJC5GQ8N7S2 189 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 OR10H4Q8NGA5 316 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 OR5W2Q8NH69 310 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 GRHL3Q8TE85 626 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 ZDHHC1Q8WTX9 485 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 RIT1Q92963 219 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 NACC2Q96BF6 587 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 SNX18Q96RF0 628 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 CITED4Q96RK1 184 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 CCNL2Q96S94 520 aaPredicted RBP6.03□□□□□ -1.44
PTPRO-208ENST00000542557 G6PC3Q9BUM1 346 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 UCK1Q9HA47 277 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 MCCC2Q9HCC0 563 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 STARD5Q9NSY2 213 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 RBFOX1Q9NWB1 397 aaKnown RBP6.03□□□□□ -1.44
PTPRO-208ENST00000542557 NDRG2Q9UN36 371 aaKnown RBP6.03□□□□□ -1.44
PTPRO-208ENST00000542557 SIRT4Q9Y6E7 314 aaPredicted RBP6.03□□□□□ -1.44
PTPRO-208ENST00000542557 UNC80Q8N2C7 3258 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 C2orf92A0A1B0GVN3 265 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 ZC3H12DA2A288 527 aaKnown RBP6.03□□□□□ -1.44
PTPRO-208ENST00000542557 SHISA7A6NL88 538 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 TGFBR3LH3BV60 316 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 ZNF749O43361 778 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 HRO43593 1189 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 FOXS1O43638 330 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 ADAM11O75078 769 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 TRIM3O75382 744 aaPredicted RBP6.03□□□□□ -1.44
PTPRO-208ENST00000542557 NCR1O76036 304 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 NSA2O95478 260 aaKnown RBP6.03□□□□□ -1.44
PTPRO-208ENST00000542557 PPP1R3DO95685 299 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 IGKV1D-16P01601 117 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 NGFRP08138 427 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 APEX1P27695 318 aaKnown RBP6.03□□□□□ -1.44
PTPRO-208ENST00000542557 NOS3P29474 1203 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 GALNSP34059 522 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 GPR143P51810 404 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 ATP12AP54707 1039 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 RPS7P62081 194 aaKnown RBP6.03□□□□□ -1.44
PTPRO-208ENST00000542557 ZNF85Q03923 595 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 FAM53BQ14153 422 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 INSL4Q14641 139 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 QPRTQ15274 297 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 DEFB110Q30KQ9 67 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.03□□□□□ -1.44
PTPRO-208ENST00000542557 B3GLCTQ6Y288 498 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 VASH1Q7L8A9 365 aaPredicted RBP6.03□□□□□ -1.44
PTPRO-208ENST00000542557 ZNF438Q7Z4V0 828 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 PXKQ7Z7A4 578 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 THNSL2Q86YJ6 484 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 C19orf18Q8NEA5 215 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 DUSP18Q8NEJ0 188 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 OR6C4Q8NGE1 309 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 ENKURQ8TC29 256 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 TOE1Q96GM8 510 aaKnown RBP6.03□□□□□ -1.44
PTPRO-208ENST00000542557 SENP5Q96HI0 755 aaPredicted RBP6.03□□□□□ -1.44
PTPRO-208ENST00000542557 ST6GAL2Q96JF0 529 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 ZNF285Q96NJ3 590 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 KCNJ15Q99712 375 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 TTYH2Q9BSA4 534 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 TMEM43Q9BTV4 400 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.03□□□□□ -1.44
PTPRO-208ENST00000542557 RNF121Q9H920 327 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 Q9N2J8 555 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 CHRNA9Q9UGM1 479 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 KLHL21Q9UJP4 597 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 ICAM5Q9UMF0 924 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 NOX1Q9Y5S8 564 aa6.03□□□□□ -1.44
PTPRO-208ENST00000542557 A0A1W2PPC4 97 aa6.02□□□□□ -1.45
PTPRO-208ENST00000542557 NDUFB2O95178 105 aa6.02□□□□□ -1.45
PTPRO-208ENST00000542557 IGF2P01344 180 aa6.02□□□□□ -1.45
PTPRO-208ENST00000542557 CD1AP06126 327 aa6.02□□□□□ -1.45
PTPRO-208ENST00000542557 FAM157BP0CG42 384 aa6.02□□□□□ -1.45
PTPRO-208ENST00000542557 PRKAR1AP10644 381 aa6.02□□□□□ -1.45
PTPRO-208ENST00000542557 MYL9P24844 172 aa6.02□□□□□ -1.45
PTPRO-208ENST00000542557 HLA-DMAP28067 261 aa6.02□□□□□ -1.45
PTPRO-208ENST00000542557 KIR2DL3P43628 341 aa6.02□□□□□ -1.45
PTPRO-208ENST00000542557 GPR3P46089 330 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms