RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 CDK6Q00534 326 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 NFYCQ13952 458 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 RABL3Q5HYI8 236 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 ZNF311Q5JNZ3 666 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 RNF220Q5VTB9 566 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 PRAMEF8Q5VWM4 474 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 PRAMEF7Q5VXH5 474 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 NANOGP8Q6NSW7 305 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 REEP3Q6NUK4 255 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 SERPINA11Q86U17 422 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 SNX32Q86XE0 403 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 TREML1Q86YW5 311 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 CNEP1R1Q8N9A8 125 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 ZNF610Q8N9Z0 462 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 ZNF563Q8TA94 476 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 RNASE6Q93091 150 aaKnown RBP8.7□□□□□ -1.02
YBX3-212ENST00000542002 ARL5BQ96KC2 179 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 ZFP3Q96NJ6 502 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 ELAC2Q9BQ52 826 aaKnown RBP8.7□□□□□ -1.02
YBX3-212ENST00000542002 SPATA9Q9BWV2 254 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 OR11A1Q9GZK7 315 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 OPN3Q9H1Y3 402 aaPredicted RBP8.7□□□□□ -1.02
YBX3-212ENST00000542002 RAD21L1Q9H4I0 556 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 PIF1Q9H611 641 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 TMEM38AQ9H6F2 299 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 NANOGQ9H9S0 305 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 CALML5Q9NZT1 146 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 STOML1Q9UBI4 398 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 OSGIN1Q9UJX0 560 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 USP22Q9UPT9 525 aa8.7□□□□□ -1.02
YBX3-212ENST00000542002 TMEM72A0PK05 275 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 ZC3H12DA2A288 527 aaKnown RBP8.69□□□□□ -1.02
YBX3-212ENST00000542002 EVPLLA8MZ36 301 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 FAAHO00519 579 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 TPST2O60704 377 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 CRHP06850 196 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 THBS1P07996 1170 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 ETS2P15036 469 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 PPIBP23284 216 aaKnown RBP8.69□□□□□ -1.02
YBX3-212ENST00000542002 TACR3P29371 465 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 AQP1P29972 269 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 LSP1P33241 339 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 NTF4P34130 210 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 SLC1A3P43003 542 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 CRYBA2P53672 197 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 PCBP3P57721 371 aaKnown RBP8.69□□□□□ -1.02
YBX3-212ENST00000542002 DMTNQ08495 405 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 FAM27E3Q08E93 113 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 SELENBP1Q13228 472 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 SCARB2Q14108 478 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 GNA13Q14344 377 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 ZNF239Q16600 458 aaKnown RBP8.69□□□□□ -1.02
YBX3-212ENST00000542002 LIN52Q52LA3 116 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 REP15Q6BDI9 236 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 OR2A2Q6IF42 318 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 PPP4R4Q6NUP7 873 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 C22orf34Q6ZV56 151 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 FAM214BQ7L5A3 538 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 GRINAQ7Z429 371 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 MTDHQ86UE4 582 aaKnown RBP8.69□□□□□ -1.02
YBX3-212ENST00000542002 ZZZ3Q8IYH5 903 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 POU5F2Q8N7G0 328 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 OR10A6Q8NH74 314 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 BBS10Q8TAM1 723 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 LINC01560Q8TB33 94 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 ABHD3Q8WU67 409 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 TMEM234Q8WY98 164 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 LRRC58Q96CX6 371 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 OR5B2Q96R09 309 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 PLSCR4Q9NRQ2 329 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 GALNT8Q9NY28 637 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 CRIM1Q9NZV1 1036 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 GMPR2Q9P2T1 348 aaKnown RBP8.69□□□□□ -1.02
YBX3-212ENST00000542002 ZNF232Q9UNY5 417 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 CENPEQ02224 2701 aa8.69□□□□□ -1.02
YBX3-212ENST00000542002 AKAP9Q99996 3911 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 TMED7-TICAM2A0A0A6YYA0 188 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 GMNCA6NCL1 334 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 TMEM247A6NEH6 219 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 ZNF814B7Z6K7 855 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 C5orf58C9J3I9 102 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 M0QX08 132 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 DYNC1I1O14576 645 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 RAMP1O60894 148 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 SS18L1O75177 396 aaPredicted RBP8.68□□□□□ -1.02
YBX3-212ENST00000542002 SMNDC1O75940 238 aaKnown RBP eCLIP8.68□□□□□ -1.02
YBX3-212ENST00000542002 MFN2O95140 757 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 SYNGR4O95473 234 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 IMPDH2P12268 514 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 SLC6A2P23975 617 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 EDNRAP25101 427 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 HTR2AP28223 471 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 ADSLP30566 484 aaPredicted RBP8.68□□□□□ -1.02
YBX3-212ENST00000542002 DIO1P49895 249 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 RAC3P60763 192 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 BNIP2Q12982 314 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 MYBPHQ13203 477 aa8.68□□□□□ -1.02
YBX3-212ENST00000542002 CYLC2Q14093 348 aaPredicted RBP8.68□□□□□ -1.02
YBX3-212ENST00000542002 LARS2Q15031 903 aaKnown RBP8.68□□□□□ -1.02
YBX3-212ENST00000542002 DUSP7Q16829 419 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms