RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 HPNP05981 417 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 DBIP07108 87 aaKnown RBP7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 C8BP07358 591 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 THBS1P07996 1170 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 NPIPA8P0DM63 369 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 ETS2P15036 469 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 FPR1P21462 350 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 SRD5A2P31213 254 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 NUDT2P50583 147 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 MNAT1P51948 309 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 SUMO3P55854 103 aaPredicted RBP7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 DSCR4P56555 118 aaPredicted RBP7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 KCNJ10P78508 379 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 CDK6Q00534 326 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 SRYQ05066 204 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 GABPB1Q06547 395 aaPredicted RBP7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 SCARB2Q14108 478 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 FGFBP1Q14512 234 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 CD226Q15762 336 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 MAPK14Q16539 360 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 ACKR1Q16570 336 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 CYP51A1Q16850 503 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 ZSWIM7Q19AV6 140 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 EIPR1Q53HC9 387 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 RABL3Q5HYI8 236 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 DCST1Q5T197 706 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 VASNQ6EMK4 673 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 ERICH5Q6P6B1 374 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 PRSS57Q6UWY2 283 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 PLXDC2Q6UX71 529 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 EIF3MQ7L2H7 374 aaKnown RBP7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 OLIG3Q7RTU3 272 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 TRPM8Q7Z2W7 1104 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 PTOV1Q86YD1 416 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 PEX5LQ8IYB4 626 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 HIPK4Q8NE63 616 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 TOR1AIP2Q8NFQ8 470 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 OR4K17Q8NGC6 315 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 OR10A6Q8NH74 314 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 MBD3L2Q8NHZ7 208 aaPredicted RBP7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 NFKBIDQ8NI38 313 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 PHOSPHO1Q8TCT1 267 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 ABTB1Q969K4 478 aaPredicted RBP7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 MAL2Q969L2 176 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 INTS12Q96CB8 462 aaKnown RBP7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 ZG16BQ96DA0 208 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 WDYHV1Q96HA8 205 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 REXO5Q96IC2 774 aaKnown RBP7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 ZNF583Q96ND8 569 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 OR2B2Q9GZK3 357 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 PTGES2Q9H7Z7 377 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 KLHL28Q9NXS3 571 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 JKAMPQ9P055 326 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 FBXL2Q9UKC9 423 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 PRDM4Q9UKN5 801 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 ANGPT4Q9Y264 503 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 SLC35A3Q9Y2D2 325 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 IFT52Q9Y366 437 aa7.83□□□□□ -1.16
CLSTN3-212ENST00000541770 A0A087WZY1 265 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 CENPVL1A0A0U1RR11 272 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 FAM220BPB1ANY3 271 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 H0Y3Z8 333 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 ZNF264O43296 627 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 DNAJA2O60884 412 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 SMNDC1O75940 238 aaKnown RBP eCLIP7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 CSTAP01040 98 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 UBL4AP11441 157 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 IL7RP16871 459 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 CALB2P22676 271 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 DPP4P27487 766 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 PCGF2P35227 344 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 PGM1P36871 562 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 P2RX1P51575 399 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 NR1H2P55055 460 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 PCBP3P57721 371 aaKnown RBP7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 ZNF117Q03924 483 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 VEZF1Q14119 521 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 LARS2Q15031 903 aaKnown RBP7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 VMACQ2NL98 169 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 GLYR1Q49A26 553 aaPredicted RBP7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 LIN52Q52LA3 116 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 NHSL2Q5HYW2 709 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 INTS11Q5TA45 600 aaKnown RBP7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 OR5M10Q6IEU7 315 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 YRDCQ86U90 279 aaKnown RBP7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 KRT73Q86Y46 540 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 GRAMD2AQ8IUY3 354 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 PHC2Q8IXK0 858 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 SLC15A3Q8IY34 581 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 GCNT2Q8N0V5 402 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 ZNF614Q8N883 585 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 GATSQ8NAP1 163 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 FAM71CQ8NEG0 241 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 FAM83FQ8NEG4 500 aaPredicted RBP7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 B4GALNT2Q8NHY0 566 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 WDR60Q8WVS4 1066 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 C1GALT1C1Q96EU7 318 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 ZC3HAV1LQ96H79 300 aaKnown RBP7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 NSL1Q96IY1 281 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms