RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 AHSA2Q719I0 299 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 P2RY8Q86VZ1 359 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 CCDC71Q8IV32 467 aaPredicted RBP7.97□□□□□ -1.13
THBS3-210ENST00000541576 NLGN4XQ8N0W4 816 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 LINC00471Q8N535 108 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 ESX1Q8N693 406 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 ZNF540Q8NDQ6 660 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 OR8K3Q8NH51 312 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 THAP3Q8WTV1 239 aaPredicted RBP7.97□□□□□ -1.13
THBS3-210ENST00000541576 SLC41A3Q96GZ6 507 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 PHOX2BQ99453 314 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 POLR2J2Q9GZM3 115 aaKnown RBP7.97□□□□□ -1.13
THBS3-210ENST00000541576 POLR2J3Q9H1A7 115 aaKnown RBP7.97□□□□□ -1.13
THBS3-210ENST00000541576 ANKRD19PQ9H560 264 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 POFUT2Q9Y2G5 429 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 IGHV1-45A0A0A0MS14 117 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 PCP4L1A6NKN8 68 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 ZNF99A8MXY4 864 aaPredicted RBP7.97□□□□□ -1.13
THBS3-210ENST00000541576 BCKDKO14874 412 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 TSPAN2O60636 221 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 ICOSLGO75144 302 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 ZFAND5O76080 213 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 ADAP00813 363 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 IGHEP01854 428 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 RAB40ALP0C0E4 278 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 CCDC159P0C7I6 412 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 MMP11P24347 488 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 HTR2AP28223 471 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 PNLIPRP2P54317 469 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 ISL1P61371 349 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 RPP38P78345 283 aaKnown RBP7.97□□□□□ -1.13
THBS3-210ENST00000541576 EMX1Q04741 257 aaPredicted RBP7.97□□□□□ -1.13
THBS3-210ENST00000541576 OR1Q1Q15612 314 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 CEP78Q5JTW2 689 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 LAIR2Q6ISS4 152 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 ZNF550Q7Z398 422 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 GDF7Q7Z4P5 450 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 OR4K5Q8NGD3 323 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 UBASH3BQ8TF42 649 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 DOK1Q99704 481 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 ZNF559Q9BR84 538 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 ZNF700Q9H0M5 742 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 ERVK13-1Q9NX77 482 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 TCFL5Q9UL49 500 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 NDRG4Q9ULP0 352 aaKnown RBP7.97□□□□□ -1.13
THBS3-210ENST00000541576 MGAT4BQ9UQ53 548 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 SLC35A3Q9Y2D2 325 aa7.97□□□□□ -1.13
THBS3-210ENST00000541576 TRAPPC13A5PLN9 417 aa7.96□□□□□ -1.13
THBS3-210ENST00000541576 PROB1E7EW31 1015 aa7.96□□□□□ -1.13
THBS3-210ENST00000541576 UGT2B11O75310 529 aa7.96□□□□□ -1.13
THBS3-210ENST00000541576 SCO1O75880 301 aa7.96□□□□□ -1.13
THBS3-210ENST00000541576 ANGPTL1O95841 491 aa7.96□□□□□ -1.13
THBS3-210ENST00000541576 COX6A1P12074 109 aa7.96□□□□□ -1.13
THBS3-210ENST00000541576 CSRP1P21291 193 aaKnown RBP7.96□□□□□ -1.13
THBS3-210ENST00000541576 TBXA2RP21731 343 aa7.96□□□□□ -1.13
THBS3-210ENST00000541576 SNRPD2P62316 118 aaKnown RBP7.96□□□□□ -1.13
THBS3-210ENST00000541576 RPS15P62841 145 aaKnown RBP7.96□□□□□ -1.13
THBS3-210ENST00000541576 BTBD16Q32M84 506 aa7.96□□□□□ -1.13
THBS3-210ENST00000541576 ZNF691Q5VV52 312 aa7.96□□□□□ -1.13
THBS3-210ENST00000541576 PGBD2Q6P3X8 592 aa7.96□□□□□ -1.13
THBS3-210ENST00000541576 C16orf47Q6ZP98 133 aaPredicted RBP7.96□□□□□ -1.13
THBS3-210ENST00000541576 ZER1Q7Z7L7 766 aa7.96□□□□□ -1.13
THBS3-210ENST00000541576 MEX3DQ86XN8 651 aaKnown RBP7.96□□□□□ -1.13
THBS3-210ENST00000541576 NKAIN4Q8IVV8 208 aa7.96□□□□□ -1.13
THBS3-210ENST00000541576 SLC38A6Q8IZM9 456 aa7.96□□□□□ -1.13
THBS3-210ENST00000541576 TOR1AIP2Q8NFQ8 470 aa7.96□□□□□ -1.13
THBS3-210ENST00000541576 GPA33Q99795 319 aa7.96□□□□□ -1.13
THBS3-210ENST00000541576 KCNS3Q9BQ31 491 aa7.96□□□□□ -1.13
THBS3-210ENST00000541576 GABARAPL3Q9BY60 117 aa7.96□□□□□ -1.13
THBS3-210ENST00000541576 TMEM27Q9HBJ8 222 aa7.96□□□□□ -1.13
THBS3-210ENST00000541576 PAK1IP1Q9NWT1 392 aaPredicted RBP7.96□□□□□ -1.13
THBS3-210ENST00000541576 FARSAQ9Y285 508 aaKnown RBP7.96□□□□□ -1.13
THBS3-210ENST00000541576 A0A087WUU8 490 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 SMIM30A4D0T7 59 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 WWP2O00308 870 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 IGFBP1P08833 259 aaPredicted RBP7.96□□□□□ -1.14
THBS3-210ENST00000541576 ENDOUP21128 410 aaKnown RBP7.96□□□□□ -1.14
THBS3-210ENST00000541576 ADH7P40394 386 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 UGT2B15P54855 530 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 RPS18P62269 152 aaKnown RBP7.96□□□□□ -1.14
THBS3-210ENST00000541576 EXT1Q16394 746 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 CTF1Q16619 201 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 NDUFAF6Q330K2 333 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 GTF2IRD2BQ6EKJ0 949 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 KLHL17Q6TDP4 642 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 KIRREL2Q6UWL6 708 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 RRM2BQ7LG56 351 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 GTF2IRD2Q86UP8 949 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 GATSQ8NAP1 163 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 PHOSPHO1Q8TCT1 267 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 DEFB126Q9BYW3 111 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 DSN1Q9H410 356 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 AKIP1Q9NQ31 210 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 ENOPH1Q9UHY7 261 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 ENPP5Q9UJA9 477 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 ZNF221Q9UK13 617 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 SLC7A7Q9UM01 511 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 NPFFR2Q9Y5X5 522 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 HEATR5AQ86XA9 2040 aa7.96□□□□□ -1.14
THBS3-210ENST00000541576 OR6C70A6NIJ9 312 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms