RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 C6orf89Q6UWU4 347 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 TMEM108Q6UXF1 575 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 ZYG11AQ6WRX3 759 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 IL17RELQ6ZVW7 336 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 GALNT5Q7Z7M9 940 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 COX18Q8N8Q8 333 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 WDR31Q8NA23 367 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 TOR1AIP2Q8NFQ8 470 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 OR2T11Q8NH01 316 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 OR5W2Q8NH69 310 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 ZFP28Q8NHY6 868 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 PHOSPHO1Q8TCT1 267 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 CDS1Q92903 461 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 MUS81Q96NY9 551 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 TUBB1Q9H4B7 451 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 GPATCH2Q9NW75 528 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 C1orf109Q9NX04 203 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 NKIRAS1Q9NYS0 192 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 KCNE5Q9UJ90 142 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 KCNE3Q9Y6H6 103 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 TGP01266 2768 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 TRRAPQ9Y4A5 3859 aa6.41□□□□□ -1.38
YBX3-209ENST00000540747 IGHV4-61A0A0C4DH41 118 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 CENPVL1A0A0U1RR11 272 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 CCT8L1PA6NM43 557 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 C9JVG2 144 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 NDUFS8O00217 210 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 EIF4E2O60573 245 aaKnown RBP6.4□□□□□ -1.38
YBX3-209ENST00000540747 RAD51DO75771 328 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 PROCP04070 461 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 PGRP06401 933 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 GSTA1P08263 222 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 PYGBP11216 843 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 HPGDP15428 266 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 SLC7A1P30825 629 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 NR4A2P43354 598 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 DIO1P49895 249 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 RNF144AP50876 292 aaPredicted RBP6.4□□□□□ -1.38
YBX3-209ENST00000540747 FABP6P51161 128 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 ZNF83P51522 516 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 ATP12AP54707 1039 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 DNAJB13P59910 316 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 NAA20P61599 178 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 PLAURQ03405 335 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 LASP1Q14847 261 aaKnown RBP6.4□□□□□ -1.38
YBX3-209ENST00000540747 QPRTQ15274 297 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 RAB35Q15286 201 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 GABRA6Q16445 453 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 IMPG1Q17R60 797 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 ZSWIM7Q19AV6 140 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 RFTN2Q52LD8 501 aaPredicted RBP6.4□□□□□ -1.38
YBX3-209ENST00000540747 DCST2Q5T1A1 773 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 AP1ARQ63HQ0 302 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 FAM166AQ6J272 317 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 C3orf33Q6P1S2 294 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 SLC22A25Q6T423 547 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 TMPPEQ6ZT21 453 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 MEX3DQ86XN8 651 aaKnown RBP6.4□□□□□ -1.38
YBX3-209ENST00000540747 LRRC34Q8IZ02 419 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 FBXL14Q8N1E6 418 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 CCNYL1Q8N7R7 359 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 ZNF527Q8NB42 609 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 FAM71CQ8NEG0 241 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 OR52N5Q8NH56 324 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 ACMSDQ8TDX5 336 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 EPS8L3Q8TE67 593 aaKnown RBP6.4□□□□□ -1.38
YBX3-209ENST00000540747 ST8SIA1Q92185 356 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 ZNF775Q96BV0 537 aaPredicted RBP6.4□□□□□ -1.38
YBX3-209ENST00000540747 PPCDCQ96CD2 204 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 MTERF3Q96E29 417 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 BOD1Q96IK1 185 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 TSSK3Q96PN8 268 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 ELAC2Q9BQ52 826 aaKnown RBP6.4□□□□□ -1.38
YBX3-209ENST00000540747 INPP5KQ9BT40 448 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 SOX7Q9BT81 388 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 HOXD1Q9GZZ0 328 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 QRSL1Q9H0R6 528 aaKnown RBP6.4□□□□□ -1.38
YBX3-209ENST00000540747 EML4Q9HC35 981 aaKnown RBP6.4□□□□□ -1.38
YBX3-209ENST00000540747 ATP6V1HQ9UI12 483 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 KCNS2Q9ULS6 477 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 DTNAQ9Y4J8 743 aa6.4□□□□□ -1.38
YBX3-209ENST00000540747 LOC100289279A0A1B0GTE1 492 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 EXOC1LA0A1B0GW35 172 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 HAX1O00165 279 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 LSM1O15116 133 aaKnown RBP6.39□□□□□ -1.39
YBX3-209ENST00000540747 ZNF264O43296 627 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 AKAP10O43572 662 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 DNPH1O43598 174 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 SEC22BO75396 215 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 IGHV3-9P01782 118 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 UROSP10746 265 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 BCKDHAP12694 445 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 EFNA1P20827 205 aaPredicted RBP6.39□□□□□ -1.39
YBX3-209ENST00000540747 SESN3P58005 492 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 PHC1P78364 1004 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 H3F3AP84243 136 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 ZNF141Q15928 474 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 TIGD2Q4W5G0 525 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 SYT14P1Q58G82 188 aa6.39□□□□□ -1.39
YBX3-209ENST00000540747 C1QTNF12Q5T7M4 302 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms