RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 WFDC11Q8NEX6 87 aa18.65■□□□□ 0.58
CHFR-217ENST00000540537 PSD2Q9BQI7 771 aa18.65■□□□□ 0.58
CHFR-217ENST00000540537 HDHD5Q9BXW7 423 aa18.65■□□□□ 0.58
CHFR-217ENST00000540537 UBTD1Q9HAC8 227 aa18.65■□□□□ 0.58
CHFR-217ENST00000540537 ING1Q9UK53 422 aaPredicted RBP18.65■□□□□ 0.58
CHFR-217ENST00000540537 SPIN1Q9Y657 262 aaPredicted RBP18.65■□□□□ 0.58
CHFR-217ENST00000540537 NF1P21359 2839 aa18.65■□□□□ 0.58
CHFR-217ENST00000540537 IGHV3-15A0A0B4J1V0 119 aa18.64■□□□□ 0.57
CHFR-217ENST00000540537 KLF11O14901 512 aa18.64■□□□□ 0.57
CHFR-217ENST00000540537 CYTIPO60759 359 aa18.64■□□□□ 0.57
CHFR-217ENST00000540537 SLC22A3O75751 556 aa18.64■□□□□ 0.57
CHFR-217ENST00000540537 IL6P05231 212 aa18.64■□□□□ 0.57
CHFR-217ENST00000540537 NR1H2P55055 460 aa18.64■□□□□ 0.57
CHFR-217ENST00000540537 CSNK2A1P68400 391 aaPredicted RBP18.64■□□□□ 0.57
CHFR-217ENST00000540537 SYT14P1Q58G82 188 aa18.64■□□□□ 0.57
CHFR-217ENST00000540537 SHEQ5VZ18 495 aa18.64■□□□□ 0.57
CHFR-217ENST00000540537 LRRC74BQ6ZQY2 392 aa18.64■□□□□ 0.57
CHFR-217ENST00000540537 TMPPEQ6ZT21 453 aa18.64■□□□□ 0.57
CHFR-217ENST00000540537 CMIPQ8IY22 773 aa18.64■□□□□ 0.57
CHFR-217ENST00000540537 ARFGAP2Q8N6H7 521 aa18.64■□□□□ 0.57
CHFR-217ENST00000540537 ANKFN1Q8N957 763 aa18.64■□□□□ 0.57
CHFR-217ENST00000540537 ZNF563Q8TA94 476 aa18.64■□□□□ 0.57
CHFR-217ENST00000540537 CCDC106Q9BWC9 280 aa18.64■□□□□ 0.57
CHFR-217ENST00000540537 SLC38A1Q9H2H9 487 aa18.64■□□□□ 0.57
CHFR-217ENST00000540537 SMAD9O15198 467 aaKnown RBP18.63■□□□□ 0.57
CHFR-217ENST00000540537 KRT75O95678 551 aa18.63■□□□□ 0.57
CHFR-217ENST00000540537 CHRM4P08173 479 aa18.63■□□□□ 0.57
CHFR-217ENST00000540537 FKBP2P26885 142 aaKnown RBP18.63■□□□□ 0.57
CHFR-217ENST00000540537 MAGEA8P43361 318 aa18.63■□□□□ 0.57
CHFR-217ENST00000540537 DIO1P49895 249 aa18.63■□□□□ 0.57
CHFR-217ENST00000540537 NKX6-1P78426 367 aaPredicted RBP18.63■□□□□ 0.57
CHFR-217ENST00000540537 PLAURQ03405 335 aa18.63■□□□□ 0.57
CHFR-217ENST00000540537 RASGEF1BQ0VAM2 473 aa18.63■□□□□ 0.57
CHFR-217ENST00000540537 SYPL1Q16563 259 aa18.63■□□□□ 0.57
CHFR-217ENST00000540537 GSTA3Q16772 222 aa18.63■□□□□ 0.57
CHFR-217ENST00000540537 SLC9B1Q4ZJI4 515 aa18.63■□□□□ 0.57
CHFR-217ENST00000540537 GRINAQ7Z429 371 aa18.63■□□□□ 0.57
CHFR-217ENST00000540537 MAVSQ7Z434 540 aa18.63■□□□□ 0.57
CHFR-217ENST00000540537 KRTAP1-3Q8IUG1 177 aa18.63■□□□□ 0.57
CHFR-217ENST00000540537 LRRC75A-AS1Q8N1F1 130 aa18.63■□□□□ 0.57
CHFR-217ENST00000540537 PIWIL2Q8TC59 973 aaKnown RBP18.63■□□□□ 0.57
CHFR-217ENST00000540537 PMM1Q92871 262 aa18.63■□□□□ 0.57
CHFR-217ENST00000540537 CCL19Q99731 98 aa18.63■□□□□ 0.57
CHFR-217ENST00000540537 CTPS2Q9NRF8 586 aa18.63■□□□□ 0.57
CHFR-217ENST00000540537 ZIM2Q9NZV7 527 aa18.63■□□□□ 0.57
CHFR-217ENST00000540537 CHRNA9Q9UGM1 479 aa18.63■□□□□ 0.57
CHFR-217ENST00000540537 AGAP5A6NIR3 686 aa18.62■□□□□ 0.57
CHFR-217ENST00000540537 CLDN24A6NM45 220 aa18.62■□□□□ 0.57
CHFR-217ENST00000540537 ZNF724A8MTY0 619 aa18.62■□□□□ 0.57
CHFR-217ENST00000540537 SULT2B1O00204 365 aa18.62■□□□□ 0.57
CHFR-217ENST00000540537 RFXANKO14593 260 aa18.62■□□□□ 0.57
CHFR-217ENST00000540537 SMPD2O60906 423 aa18.62■□□□□ 0.57
CHFR-217ENST00000540537 GSNP06396 782 aa18.62■□□□□ 0.57
CHFR-217ENST00000540537 RPS4Y1P22090 263 aaKnown RBP18.62■□□□□ 0.57
CHFR-217ENST00000540537 RYKP34925 604 aa18.62■□□□□ 0.57
CHFR-217ENST00000540537 P2RY6Q15077 328 aa18.62■□□□□ 0.57
CHFR-217ENST00000540537 SFRP5Q5T4F7 317 aa18.62■□□□□ 0.57
CHFR-217ENST00000540537 MSANTD1Q6ZTZ1 278 aa18.62■□□□□ 0.57
CHFR-217ENST00000540537 HMGN2P46Q86SG4 172 aa18.62■□□□□ 0.57
CHFR-217ENST00000540537 WFDC8Q8IUA0 241 aa18.62■□□□□ 0.57
CHFR-217ENST00000540537 S100PBPQ96BU1 408 aa18.62■□□□□ 0.57
CHFR-217ENST00000540537 MTHFD2LQ9H903 347 aaPredicted RBP18.62■□□□□ 0.57
CHFR-217ENST00000540537 SDR39U1Q9NRG7 319 aaPredicted RBP18.62■□□□□ 0.57
CHFR-217ENST00000540537 ARHGEF9O43307 516 aa18.61■□□□□ 0.57
CHFR-217ENST00000540537 FESP07332 822 aa18.61■□□□□ 0.57
CHFR-217ENST00000540537 NR2F1P10589 423 aa18.61■□□□□ 0.57
CHFR-217ENST00000540537 IL32P24001 234 aa18.61■□□□□ 0.57
CHFR-217ENST00000540537 HTR3AP46098 478 aa18.61■□□□□ 0.57
CHFR-217ENST00000540537 OR3A2P47893 321 aa18.61■□□□□ 0.57
CHFR-217ENST00000540537 CLK1P49759 484 aaKnown RBP18.61■□□□□ 0.57
CHFR-217ENST00000540537 COX20Q5RI15 118 aa18.61■□□□□ 0.57
CHFR-217ENST00000540537 ABLIM2Q6H8Q1 611 aa18.61■□□□□ 0.57
CHFR-217ENST00000540537 ZNF704Q6ZNC4 412 aaPredicted RBP18.61■□□□□ 0.57
CHFR-217ENST00000540537 PNPT1Q8TCS8 783 aaKnown RBP18.61■□□□□ 0.57
CHFR-217ENST00000540537 CNOT9Q92600 299 aaKnown RBP18.61■□□□□ 0.57
CHFR-217ENST00000540537 ZNF75CPQ92670 426 aaPredicted RBP18.61■□□□□ 0.57
CHFR-217ENST00000540537 PLPPR2Q96GM1 343 aa18.61■□□□□ 0.57
CHFR-217ENST00000540537 USB1Q9BQ65 265 aaKnown RBP18.61■□□□□ 0.57
CHFR-217ENST00000540537 HDGFL3Q9Y3E1 203 aa18.61■□□□□ 0.57
CHFR-217ENST00000540537 ZNF814B7Z6K7 855 aa18.6■□□□□ 0.57
CHFR-217ENST00000540537 UBDO15205 165 aa18.6■□□□□ 0.57
CHFR-217ENST00000540537 ADAM11O75078 769 aa18.6■□□□□ 0.57
CHFR-217ENST00000540537 PMS2P2O95744 297 aa18.6■□□□□ 0.57
CHFR-217ENST00000540537 ADAP00813 363 aa18.6■□□□□ 0.57
CHFR-217ENST00000540537 ZCCHC18P0CG32 403 aa18.6■□□□□ 0.57
CHFR-217ENST00000540537 TFPIP10646 304 aa18.6■□□□□ 0.57
CHFR-217ENST00000540537 ITGADQ13349 1161 aa18.6■□□□□ 0.57
CHFR-217ENST00000540537 GNA13Q14344 377 aa18.6■□□□□ 0.57
CHFR-217ENST00000540537 PDK3Q15120 406 aa18.6■□□□□ 0.57
CHFR-217ENST00000540537 AGBL2Q5U5Z8 902 aa18.6■□□□□ 0.57
CHFR-217ENST00000540537 DNAJC14Q6Y2X3 702 aaPredicted RBP18.6■□□□□ 0.57
CHFR-217ENST00000540537 Q6ZT83 130 aa18.6■□□□□ 0.57
CHFR-217ENST00000540537 MTDHQ86UE4 582 aaKnown RBP18.6■□□□□ 0.57
CHFR-217ENST00000540537 P3H2Q8IVL5 708 aa18.6■□□□□ 0.57
CHFR-217ENST00000540537 WDR60Q8WVS4 1066 aa18.6■□□□□ 0.57
CHFR-217ENST00000540537 KISS1RQ969F8 398 aaPredicted RBP18.6■□□□□ 0.57
CHFR-217ENST00000540537 ZHX1-C8orf76Q96EF9 292 aa18.6■□□□□ 0.57
CHFR-217ENST00000540537 OR52B2Q96RD2 323 aa18.6■□□□□ 0.57
CHFR-217ENST00000540537 ZNF300Q96RE9 604 aaPredicted RBP18.6■□□□□ 0.57
CHFR-217ENST00000540537 TMEM204Q9BSN7 226 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms