RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 PRG2P13727 222 aa13.45□□□□□ -0.26
UBE3B-212ENST00000540230 SLC7A1P30825 629 aa13.45□□□□□ -0.26
UBE3B-212ENST00000540230 CCKARP32238 428 aa13.45□□□□□ -0.26
UBE3B-212ENST00000540230 SORDQ00796 357 aa13.45□□□□□ -0.26
UBE3B-212ENST00000540230 EPS8Q12929 822 aa13.45□□□□□ -0.26
UBE3B-212ENST00000540230 SELPLGQ14242 412 aa13.45□□□□□ -0.26
UBE3B-212ENST00000540230 LIN52Q52LA3 116 aa13.45□□□□□ -0.26
UBE3B-212ENST00000540230 SYT14P1Q58G82 188 aa13.45□□□□□ -0.26
UBE3B-212ENST00000540230 GRINAQ7Z429 371 aa13.45□□□□□ -0.26
UBE3B-212ENST00000540230 DHDDSQ86SQ9 333 aa13.45□□□□□ -0.26
UBE3B-212ENST00000540230 ADGRG3Q86Y34 549 aa13.45□□□□□ -0.26
UBE3B-212ENST00000540230 NFKBIDQ8NI38 313 aa13.45□□□□□ -0.26
UBE3B-212ENST00000540230 PMM1Q92871 262 aa13.45□□□□□ -0.26
UBE3B-212ENST00000540230 ARL5BQ96KC2 179 aa13.45□□□□□ -0.26
UBE3B-212ENST00000540230 OR11A1Q9GZK7 315 aa13.45□□□□□ -0.26
UBE3B-212ENST00000540230 RAD21L1Q9H4I0 556 aa13.45□□□□□ -0.26
UBE3B-212ENST00000540230 THUMPD1Q9NXG2 353 aaKnown RBP13.45□□□□□ -0.26
UBE3B-212ENST00000540230 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.45□□□□□ -0.26
UBE3B-212ENST00000540230 LEF1Q9UJU2 399 aaPredicted RBP13.45□□□□□ -0.26
UBE3B-212ENST00000540230 NDUFAF1Q9Y375 327 aa13.45□□□□□ -0.26
UBE3B-212ENST00000540230 A0A0G2JPF8 293 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 TUBAL3A6NHL2 446 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 HNRNPCL2B2RXH8 293 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 HNRNPCL3B7ZW38 293 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 HNRNPCL1O60812 293 aaKnown RBP13.44□□□□□ -0.26
UBE3B-212ENST00000540230 PGM3O95394 542 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 PLGP00747 810 aaPredicted RBP13.44□□□□□ -0.26
UBE3B-212ENST00000540230 HNRNPCL4P0DMR1 293 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 CD8BP10966 210 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 CCNA2P20248 432 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 AGTR1P30556 359 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 ACAA2P42765 397 aaKnown RBP13.44□□□□□ -0.26
UBE3B-212ENST00000540230 ARFIP2P53365 341 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 RUNDC3AQ59EK9 446 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 GCNT6Q5T4J0 391 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 RNF220Q5VTB9 566 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 EEF1A1P5Q5VTE0 462 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 METTL21CQ5VZV1 264 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 FCRLAQ7L513 359 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 COMTD1Q86VU5 262 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 TMEM200AQ86VY9 491 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 KIF18BQ86Y91 864 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 NRGNQ92686 78 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 GPATCH1Q9BRR8 931 aaKnown RBP13.44□□□□□ -0.26
UBE3B-212ENST00000540230 BCL2L10Q9HD36 194 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 CHRNA9Q9UGM1 479 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 OSGIN1Q9UJX0 560 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 ING1Q9UK53 422 aaPredicted RBP13.44□□□□□ -0.26
UBE3B-212ENST00000540230 PROCRQ9UNN8 238 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 FREM1Q5H8C1 2179 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 CREBBPQ92793 2442 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 CFAP73A6NFT4 308 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 FBP2O00757 339 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 SMAD9O15198 467 aaKnown RBP13.44□□□□□ -0.26
UBE3B-212ENST00000540230 FRS3O43559 492 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 CTAG2O75638 210 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 THBS1P07996 1170 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 PABPC4LP0CB38 370 aaKnown RBP13.44□□□□□ -0.26
UBE3B-212ENST00000540230 GPX2P18283 190 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 MDH1P40925 334 aaKnown RBP13.44□□□□□ -0.26
UBE3B-212ENST00000540230 APOBEC1P41238 236 aaKnown RBP13.44□□□□□ -0.26
UBE3B-212ENST00000540230 DIO1P49895 249 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 MTPNP58546 118 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 RAC3P60763 192 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 GNA13Q14344 377 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 ADRM1Q16186 407 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 NUFIP2Q7Z417 695 aaKnown RBP13.44□□□□□ -0.26
UBE3B-212ENST00000540230 SERPINA11Q86U17 422 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 DPP10Q8N608 796 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 OR6K3Q8NGY3 331 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 ZNF317Q96PQ6 595 aaPredicted RBP13.44□□□□□ -0.26
UBE3B-212ENST00000540230 C12orf49Q9H741 205 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 SLC24A3Q9HC58 644 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 SERINC1Q9NRX5 453 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 EMC9Q9Y3B6 208 aa13.44□□□□□ -0.26
UBE3B-212ENST00000540230 TMED7-TICAM2A0A0A6YYA0 188 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 TMEM72A0PK05 275 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 FAM221AA4D161 298 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 TMEM247A6NEH6 219 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 FAAHO00519 579 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 ANGPT2O15123 496 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 PPIBP23284 216 aaKnown RBP13.43□□□□□ -0.26
UBE3B-212ENST00000540230 TACR3P29371 465 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 CD79BP40259 229 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 PEX19P40855 299 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 CTBP2P56545 445 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 CDK6Q00534 326 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 CAPRIN1Q14444 709 aaKnown RBP13.43□□□□□ -0.26
UBE3B-212ENST00000540230 EXOC3L2Q2M3D2 409 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 GLIPR1L2Q4G1C9 344 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 ZNF311Q5JNZ3 666 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 PRAMEF8Q5VWM4 474 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 PRAMEF7Q5VXH5 474 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 TMPPEQ6ZT21 453 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 C22orf34Q6ZV56 151 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 TUSC5Q8IXB3 177 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 BBS10Q8TAM1 723 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 FAM222BQ8WU58 562 aa13.43□□□□□ -0.26
UBE3B-212ENST00000540230 SLC25A43Q8WUT9 341 aaPredicted RBP13.43□□□□□ -0.26
UBE3B-212ENST00000540230 ANKRD27Q96NW4 1050 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms