RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 OVCH2Q7RTZ1 564 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 MAMDC2Q7Z304 686 aaPredicted RBP7.1□□□□□ -1.27
CCDC60-204ENST00000539847 C16orf62Q7Z3J2 963 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 COMMD6Q7Z4G1 85 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 UBE3DQ7Z6J8 389 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 ARHGEF39Q8N4T4 335 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 SPICQ8N5J4 248 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 KCT2Q8NC54 265 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 SRFBP1Q8NEF9 429 aaKnown RBP7.1□□□□□ -1.27
CCDC60-204ENST00000539847 BBS10Q8TAM1 723 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 NEIL3Q8TAT5 605 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 SLC7A13Q8TCU3 470 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 SLC38A5Q8WUX1 472 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 ASB13Q8WXK3 278 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 PHYHIPQ92561 330 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 OSTF1Q92882 214 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 FOPNLQ96NB1 174 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 FANCD2OSQ96PS1 177 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 OR4K3Q96R72 315 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 MTERF1Q99551 399 aaKnown RBP7.1□□□□□ -1.27
CCDC60-204ENST00000539847 DPYSL5Q9BPU6 564 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 ZNF649Q9BS31 505 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 ZSCAN5AQ9BUG6 496 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 SGPP1Q9BX95 441 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 ZNF436Q9C0F3 470 aaPredicted RBP7.1□□□□□ -1.27
CCDC60-204ENST00000539847 PITHD1Q9GZP4 211 aaPredicted RBP7.1□□□□□ -1.27
CCDC60-204ENST00000539847 RNF32Q9H0A6 362 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 HDHD2Q9H0R4 259 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 ABCG5Q9H222 651 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 OSGEPL1Q9H4B0 414 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 DMRT3Q9NQL9 472 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 NANSQ9NR45 359 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 IMP3Q9NV31 184 aaKnown RBP7.1□□□□□ -1.27
CCDC60-204ENST00000539847 SLCO1C1Q9NYB5 712 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 AKAP7Q9P0M2 348 aaPredicted RBP7.1□□□□□ -1.27
CCDC60-204ENST00000539847 ABRACLQ9P1F3 81 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 MOSPD1Q9UJG1 213 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 FBXL3Q9UKT7 428 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 FBXW2Q9UKT8 454 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 ACSL5Q9ULC5 683 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 CLEC4EQ9ULY5 219 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 A4GNTQ9UNA3 340 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 SLC9A8Q9Y2E8 581 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 SESN1Q9Y6P5 492 aa7.1□□□□□ -1.27
CCDC60-204ENST00000539847 ARID1BQ8NFD5 2236 aaPredicted RBP7.1□□□□□ -1.27
CCDC60-204ENST00000539847 TRAV1-2A0A0B4J238 106 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 TEX13CA0A0J9YWL9 993 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 A0A1W2PR77 199 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 A0A1W2PRG6 482 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 SLC5A10A0PJK1 596 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 ARHGEF33A8MVX0 844 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 E7EQ34 232 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 J3QRE1 110 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 M0R129 80 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 GTPBP1O00178 669 aaKnown RBP7.09□□□□□ -1.27
CCDC60-204ENST00000539847 GPR171O14626 319 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 LATO43561 262 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 KLHL18O94889 574 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 UBL3O95164 117 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 ETHE1O95571 254 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 POP4O95707 220 aaKnown RBP7.09□□□□□ -1.27
CCDC60-204ENST00000539847 IL5P05113 134 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 DRD2P14416 443 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 ZNF250P15622 560 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 TYRP1P17643 537 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 ELK1P19419 428 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 DDCP20711 480 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 MMP11P24347 488 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 ACP1P24666 158 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 DNASE1P24855 282 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 CD38P28907 300 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 EPHA8P29322 1005 aaPredicted RBP7.09□□□□□ -1.27
CCDC60-204ENST00000539847 AVPR1BP47901 424 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 TGM4P49221 684 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 GFRA1P56159 465 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 CTBP2P56545 445 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 TAS2R43P59537 309 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 TLE3Q04726 772 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 EIF2B5Q13144 721 aaKnown RBP7.09□□□□□ -1.27
CCDC60-204ENST00000539847 DDX39BQ13838 428 aaKnown RBP7.09□□□□□ -1.27
CCDC60-204ENST00000539847 EXOSC2Q13868 293 aaKnown RBP7.09□□□□□ -1.27
CCDC60-204ENST00000539847 SLBPQ14493 270 aaKnown RBP eCLIP7.09□□□□□ -1.27
CCDC60-204ENST00000539847 GANABQ14697 944 aaKnown RBP7.09□□□□□ -1.27
CCDC60-204ENST00000539847 PTPRRQ15256 657 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 GSG1Q2KHT4 349 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 SLC36A2Q495M3 483 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 NHLRC3Q5JS37 347 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 ELFN2Q5R3F8 820 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 ATXN7L2Q5T6C5 722 aaPredicted RBP7.09□□□□□ -1.27
CCDC60-204ENST00000539847 HENMT1Q5T8I9 393 aaKnown RBP7.09□□□□□ -1.27
CCDC60-204ENST00000539847 PXDC1Q5TGL8 231 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 HES3Q5TGS1 186 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 PRAMEF13Q5VWM6 474 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 KIAA1161Q6NSJ0 714 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 CDC73Q6P1J9 531 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 PODNL1Q6PEZ8 512 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 PAQR6Q6TCH4 344 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 ARSKQ6UWY0 536 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 PLEKHM3Q6ZWE6 761 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 KRT74Q7RTS7 529 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms