RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 RNFT2Q96EX2 444 aa20.53■□□□□ 0.88
HOMER3-204ENST00000539827 NPFFR2Q9Y5X5 522 aa20.53■□□□□ 0.88
HOMER3-204ENST00000539827 ELOA3DA6NLF2 546 aaPredicted RBP20.52■□□□□ 0.88
HOMER3-204ENST00000539827 ALG1L2C9J202 215 aa20.52■□□□□ 0.88
HOMER3-204ENST00000539827 HCRTR2O43614 444 aa20.52■□□□□ 0.88
HOMER3-204ENST00000539827 HSMCR30P0CW71 290 aa20.52■□□□□ 0.88
HOMER3-204ENST00000539827 DMDP11532 3685 aa20.52■□□□□ 0.88
HOMER3-204ENST00000539827 GRK5P34947 590 aa20.52■□□□□ 0.88
HOMER3-204ENST00000539827 CLDN6P56747 220 aa20.52■□□□□ 0.88
HOMER3-204ENST00000539827 NRG3P56975 720 aa20.52■□□□□ 0.88
HOMER3-204ENST00000539827 ELOA3BQ3SY89 546 aa20.52■□□□□ 0.88
HOMER3-204ENST00000539827 RALGAPA1Q6GYQ0 2036 aa20.52■□□□□ 0.88
HOMER3-204ENST00000539827 BBS1Q8NFJ9 593 aa20.52■□□□□ 0.88
HOMER3-204ENST00000539827 ELOA3Q8NG57 546 aa20.52■□□□□ 0.88
HOMER3-204ENST00000539827 OTULINQ96BN8 352 aa20.52■□□□□ 0.88
HOMER3-204ENST00000539827 LGALS12Q96DT0 336 aa20.52■□□□□ 0.88
HOMER3-204ENST00000539827 DTNBP1Q96EV8 351 aa20.52■□□□□ 0.88
HOMER3-204ENST00000539827 DEPDC7Q96QD5 511 aa20.52■□□□□ 0.88
HOMER3-204ENST00000539827 C19orf25Q9UFG5 118 aaPredicted RBP20.52■□□□□ 0.88
HOMER3-204ENST00000539827 PPIEQ9UNP9 301 aaKnown RBP20.52■□□□□ 0.88
HOMER3-204ENST00000539827 COL27A1Q8IZC6 1860 aaPredicted RBP20.52■□□□□ 0.88
HOMER3-204ENST00000539827 A0A1W2PQD3 144 aa20.52■□□□□ 0.87
HOMER3-204ENST00000539827 GABARAPO95166 117 aa20.52■□□□□ 0.87
HOMER3-204ENST00000539827 SLC26A5P58743 744 aa20.52■□□□□ 0.87
HOMER3-204ENST00000539827 DOC2BQ14184 412 aa20.52■□□□□ 0.87
HOMER3-204ENST00000539827 MED22Q15528 200 aa20.52■□□□□ 0.87
HOMER3-204ENST00000539827 AADACL4Q5VUY2 407 aa20.52■□□□□ 0.87
HOMER3-204ENST00000539827 RPL13AP3Q6NVV1 102 aa20.52■□□□□ 0.87
HOMER3-204ENST00000539827 FAM198BQ6UWH4 519 aa20.52■□□□□ 0.87
HOMER3-204ENST00000539827 ZNF367Q7RTV3 350 aa20.52■□□□□ 0.87
HOMER3-204ENST00000539827 ATG4DQ86TL0 474 aaPredicted RBP20.52■□□□□ 0.87
HOMER3-204ENST00000539827 LRRC17Q8N6Y2 441 aa20.52■□□□□ 0.87
HOMER3-204ENST00000539827 GALNT6Q8NCL4 622 aa20.52■□□□□ 0.87
HOMER3-204ENST00000539827 MCCC2Q9HCC0 563 aa20.52■□□□□ 0.87
HOMER3-204ENST00000539827 TIMMDC1Q9NPL8 285 aa20.52■□□□□ 0.87
HOMER3-204ENST00000539827 HINT3Q9NQE9 182 aaKnown RBP20.52■□□□□ 0.87
HOMER3-204ENST00000539827 MED17Q9NVC6 651 aa20.52■□□□□ 0.87
HOMER3-204ENST00000539827 IGKV1D-42A0A075B6H8 117 aa20.51■□□□□ 0.87
HOMER3-204ENST00000539827 FAM183AA6NL82 134 aa20.51■□□□□ 0.87
HOMER3-204ENST00000539827 FADS1O60427 444 aa20.51■□□□□ 0.87
HOMER3-204ENST00000539827 ZNF182P17025 639 aaPredicted RBP20.51■□□□□ 0.87
HOMER3-204ENST00000539827 MST1P26927 711 aa20.51■□□□□ 0.87
HOMER3-204ENST00000539827 ITPKBP27987 946 aa20.51■□□□□ 0.87
HOMER3-204ENST00000539827 CCKBRP32239 447 aa20.51■□□□□ 0.87
HOMER3-204ENST00000539827 ETV5P41161 510 aa20.51■□□□□ 0.87
HOMER3-204ENST00000539827 GAS1P54826 345 aa20.51■□□□□ 0.87
HOMER3-204ENST00000539827 FHL1Q13642 323 aa20.51■□□□□ 0.87
HOMER3-204ENST00000539827 ARMCX4Q5H9R4 360 aa20.51■□□□□ 0.87
HOMER3-204ENST00000539827 FCRLBQ6BAA4 426 aa20.51■□□□□ 0.87
HOMER3-204ENST00000539827 PAQR6Q6TCH4 344 aa20.51■□□□□ 0.87
HOMER3-204ENST00000539827 CPOQ8IVL8 374 aa20.51■□□□□ 0.87
HOMER3-204ENST00000539827 KMT2EQ8IZD2 1858 aa20.51■□□□□ 0.87
HOMER3-204ENST00000539827 TMEM200CA6NKL6 621 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 PPP1R3DO95685 299 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 EVI2BP34910 448 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 CDH11P55287 796 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 SHFQ7M4L6 423 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 LNX2Q8N448 690 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 NUBPLQ8TB37 319 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 RPL3LQ92901 407 aaKnown RBP20.5■□□□□ 0.87
HOMER3-204ENST00000539827 CMKLR1Q99788 373 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 WDR54Q9H977 334 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 PTRH2Q9Y3E5 179 aaKnown RBP20.5■□□□□ 0.87
HOMER3-204ENST00000539827 B3GALT1Q9Y5Z6 326 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 GPR179Q6PRD1 2367 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 OR6C70A6NIJ9 312 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 SNTNA6NMZ2 147 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 SOCS6O14544 535 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 GALR2O43603 387 aaPredicted RBP20.5■□□□□ 0.87
HOMER3-204ENST00000539827 PPM1BO75688 479 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 RAB36O95755 333 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 SLC6A8P48029 635 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 FBXW4P57775 412 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 FOXK2Q01167 660 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 TOMM34Q15785 309 aaPredicted RBP20.5■□□□□ 0.87
HOMER3-204ENST00000539827 KLHL22Q53GT1 634 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 CXXC5Q7LFL8 322 aaKnown RBP20.5■□□□□ 0.87
HOMER3-204ENST00000539827 NAXDQ8IW45 347 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 LRFN5Q96NI6 719 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 MED20Q9H944 212 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 AKAP7Q9P0M2 348 aaPredicted RBP20.5■□□□□ 0.87
HOMER3-204ENST00000539827 NXT1Q9UKK6 140 aaKnown RBP20.5■□□□□ 0.87
HOMER3-204ENST00000539827 ERGIC3Q9Y282 383 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 LOXL2Q9Y4K0 774 aa20.5■□□□□ 0.87
HOMER3-204ENST00000539827 B4E171 279 aa20.49■□□□□ 0.87
HOMER3-204ENST00000539827 EIF4E2O60573 245 aaKnown RBP20.49■□□□□ 0.87
HOMER3-204ENST00000539827 PNMTP11086 282 aa20.49■□□□□ 0.87
HOMER3-204ENST00000539827 TSPAN7P41732 249 aa20.49■□□□□ 0.87
HOMER3-204ENST00000539827 MTNR1AP48039 350 aa20.49■□□□□ 0.87
HOMER3-204ENST00000539827 VBP1P61758 197 aa20.49■□□□□ 0.87
HOMER3-204ENST00000539827 PLBD1Q6P4A8 553 aa20.49■□□□□ 0.87
HOMER3-204ENST00000539827 SLC46A3Q7Z3Q1 461 aa20.49■□□□□ 0.87
HOMER3-204ENST00000539827 TAPBPLQ9BX59 468 aa20.49■□□□□ 0.87
HOMER3-204ENST00000539827 H2AFY2Q9P0M6 372 aaPredicted RBP20.49■□□□□ 0.87
HOMER3-204ENST00000539827 DIMT1Q9UNQ2 313 aaKnown RBP20.49■□□□□ 0.87
HOMER3-204ENST00000539827 C9J4A7 227 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 CSO75390 466 aaKnown RBP20.48■□□□□ 0.87
HOMER3-204ENST00000539827 OR7A10O76100 309 aa20.48■□□□□ 0.87
HOMER3-204ENST00000539827 NADKO95544 446 aaPredicted RBP20.48■□□□□ 0.87
HOMER3-204ENST00000539827 NUDT14O95848 222 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms