RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 FOXF1Q12946 379 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 DAG1Q14118 895 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 TOMM20Q15388 145 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 ELOA3BQ3SY89 546 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 BORAQ6PGQ7 559 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 INO80CQ6PI98 192 aaPredicted RBP12.86□□□□□ -0.35
CD4-208ENST00000538827 IZUMO2Q6UXV1 221 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 PLCZ1Q86YW0 608 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 ATG16L2Q8NAA4 619 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 ELOA3Q8NG57 546 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 OR1J4Q8NGS1 313 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 GPR119Q8TDV5 335 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 TMEM255BQ8WV15 326 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 SNRNP27Q8WVK2 155 aaKnown RBP12.86□□□□□ -0.35
CD4-208ENST00000538827 C3orf49Q96BT1 292 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 TMEM41AQ96HV5 264 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 RNF32Q9H0A6 362 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 GABARAPL1Q9H0R8 117 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 ANKRD19PQ9H560 264 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 PTGES2Q9H7Z7 377 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 SMURF2Q9HAU4 748 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 PROK2Q9HC23 129 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 DEPPQ9NTK1 212 aa12.86□□□□□ -0.35
CD4-208ENST00000538827 TUBA8Q9NY65 449 aaPredicted RBP12.86□□□□□ -0.35
CD4-208ENST00000538827 KLF13Q9Y2Y9 288 aaPredicted RBP12.86□□□□□ -0.35
CD4-208ENST00000538827 NOTCH2Q04721 2471 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 IGLV3-32A0A0A0MS00 114 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 A0A1W2PRQ8 180 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 B4DXG7 233 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 CEACAM4O75871 244 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 THRBP10828 461 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 CNR1P21554 472 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 TACR3P29371 465 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 UGT2B15P54855 530 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 ALDH6A1Q02252 535 aaKnown RBP12.85□□□□□ -0.35
CD4-208ENST00000538827 PLGLB1Q02325 96 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 MERTKQ12866 999 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 DGCR6Q14129 220 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 GK3PQ14409 553 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 SEC23BQ15437 767 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 ANKRD34AQ69YU3 496 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 SLC25A25Q6KCM7 469 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 ULK3Q6PHR2 472 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 TBPL2Q6SJ96 375 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 ARSKQ6UWY0 536 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 WDR88Q6ZMY6 472 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 RRM2BQ7LG56 351 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 PRICKLE2Q7Z3G6 844 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 LSMEM1Q8N8F7 131 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 FADS6Q8N9I5 356 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 WDSUB1Q8N9V3 476 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 AQP11Q8NBQ7 271 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 MDS2Q8NDY4 140 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 MAGEE2Q8TD90 523 aaPredicted RBP12.85□□□□□ -0.35
CD4-208ENST00000538827 DNAJA4Q8WW22 397 aaPredicted RBP12.85□□□□□ -0.35
CD4-208ENST00000538827 ACOT11Q8WXI4 607 aaPredicted RBP12.85□□□□□ -0.35
CD4-208ENST00000538827 TMEM234Q8WY98 164 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 FAM173AQ9BQD7 235 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 KRCC1Q9NPI7 259 aaPredicted RBP12.85□□□□□ -0.35
CD4-208ENST00000538827 MED17Q9NVC6 651 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 BOKQ9UMX3 212 aaPredicted RBP12.85□□□□□ -0.35
CD4-208ENST00000538827 SSUH2Q9Y2M2 353 aa12.85□□□□□ -0.35
CD4-208ENST00000538827 NCKAP5O14513 1909 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 MPDZO75970 2070 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 SH3PXD2BA1X283 911 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 PINLYPA6NC86 204 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 ANKRD33BA6NCL7 494 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 SHISA8B8ZZ34 492 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 PEX1O43933 1283 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 NME2P1O60361 137 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 LYPD3O95274 346 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 RASAL1O95294 804 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 SP1P08047 785 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 HK1P19367 917 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 NME2P22392 152 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 MST1P26927 711 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 RFC3P40938 356 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 SLC1A3P43003 542 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 LIMS1P48059 325 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 MEOX1P50221 254 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 AQP4P55087 323 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 MICAQ29983 383 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 ZNF766Q5HY98 468 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 TTC33Q6PID6 262 aaPredicted RBP12.84□□□□□ -0.35
CD4-208ENST00000538827 GALNTL5Q7Z4T8 443 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 MEX3DQ86XN8 651 aaKnown RBP12.84□□□□□ -0.35
CD4-208ENST00000538827 P3H2Q8IVL5 708 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 OR2M7Q8NG81 312 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 OR4K5Q8NGD3 323 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 PFN4Q8NHR9 129 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 PIGXQ8TBF5 258 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 SLC7A13Q8TCU3 470 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 TMEM239Q8WW34 195 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 ST8SIA1Q92185 356 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 TM9SF4Q92544 642 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 ZNF524Q96C55 264 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 C1GALT1C1Q96EU7 318 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 NRBF2Q96F24 287 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 SLC29A1Q99808 456 aa12.84□□□□□ -0.35
CD4-208ENST00000538827 RBM4BQ9BQ04 359 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 1635.4 ms