RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 TECPR1Q7Z6L1 1165 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 MISPQ8IVT2 679 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 ENDOVQ8N8Q3 282 aaKnown RBP4.99□□□□□ -1.61
LRP6-203ENST00000538239 ZNF709Q8N972 641 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 OR2I1PQ8NGU4 316 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 OR5W2Q8NH69 310 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 TCEAL3Q969E4 200 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 LRRC61Q9BV99 259 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 SLC25A18Q9H1K4 315 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 POLE3Q9NRF9 147 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 ACSS1Q9NUB1 689 aaPredicted RBP4.99□□□□□ -1.61
LRP6-203ENST00000538239 STUB1Q9UNE7 303 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 PRRG2O14669 202 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 CBFA2T3O75081 653 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 LPLP06858 475 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 NUDT7P0C024 238 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 ST6GAL1P15907 406 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 RFC3P40938 356 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 MYBPHQ13203 477 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 SELPLGQ14242 412 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 ARSKQ6UWY0 536 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 DCDC5Q6ZRR9 648 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 RFT1Q96AA3 541 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 COQ10AQ96MF6 247 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 ZNF578Q96N58 590 aaPredicted RBP4.99□□□□□ -1.61
LRP6-203ENST00000538239 ZNF300Q96RE9 604 aaPredicted RBP4.99□□□□□ -1.61
LRP6-203ENST00000538239 ST6GALNAC5Q9BVH7 336 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 TCEAL2Q9H3H9 227 aaPredicted RBP4.99□□□□□ -1.61
LRP6-203ENST00000538239 PDFQ9HBH1 243 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 MAN2C1Q9NTJ4 1040 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 NUDT15Q9NV35 164 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 ABCG2Q9UNQ0 655 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 WDR37Q9Y2I8 494 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 KCNIP3Q9Y2W7 256 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 OR51B4Q9Y5P0 310 aa4.99□□□□□ -1.61
LRP6-203ENST00000538239 COL11A2P13942 1736 aaPredicted RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 C12orf71A8MTZ7 269 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 MPIG6BO95866 241 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 FURINP09958 794 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 SLC35E2P0CK97 266 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 AKR1C4P17516 323 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 EPHA1P21709 976 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 LSSP48449 732 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 CXCR4P61073 352 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 DPTQ07507 201 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 HTR4Q13639 388 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 TUBA3CQ13748 450 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 ATXN7L3Q14CW9 347 aaPredicted RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 CNN3Q15417 329 aaKnown RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 SLC6A19Q695T7 634 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 OLIG3Q7RTU3 272 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 TMEM151AQ8N4L1 468 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 CPT1CQ8TCG5 803 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 C1QTNF6Q9BXI9 259 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 SAP130Q9H0E3 1048 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 OR52D1Q9H346 318 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 GLIPR2Q9H4G4 154 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 EGLN3Q9H6Z9 239 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 TUBA8Q9NY65 449 aaPredicted RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 LUZP4Q9P127 313 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 COPZ2Q9P299 210 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 MED16Q9Y2X0 877 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 UBE2J1Q9Y385 318 aaPredicted RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 ARHGAP33O14559 1287 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 ALDOCP09972 364 aaKnown RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 BIDP55957 195 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 TUBA1BP68363 451 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 TUBA4AP68366 448 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 PSPHP78330 225 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 COL13A1Q5TAT6 717 aaPredicted RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 GUSBP11Q6P575 273 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 ABHD17CQ6PCB6 329 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 C3P1Q6ZMU1 363 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 TUBA1AQ71U36 451 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 RPS19BP1Q86WX3 136 aaKnown RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 METTL25Q8N6Q8 603 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 AKAP1Q92667 903 aaKnown RBP eCLIP4.98□□□□□ -1.61
LRP6-203ENST00000538239 NECAB3Q96P71 396 aaPredicted RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 NELFAQ9H3P2 528 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 PLEKHJ1Q9NW61 149 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 TESQ9UGI8 421 aaKnown RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 DUSP13Q9UII6 198 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 TMA7Q9Y2S6 64 aaKnown RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 TCRBV5S1A1TA0A578 114 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 FAM183AA6NL82 134 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 ZNF587BE7ETH6 402 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 SLC19A1P41440 591 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 OTUD1Q5VV17 481 aaPredicted RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 OR8H3Q8N146 312 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 SLC37A3Q8NCC5 494 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 UBTD2Q8WUN7 234 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 TAMM41Q96BW9 452 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 C1QTNF2Q9BXJ5 285 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 DDX31Q9H8H2 851 aaKnown RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 PAK1IP1Q9NWT1 392 aaPredicted RBP4.98□□□□□ -1.61
LRP6-203ENST00000538239 RHBDD3Q9Y3P4 386 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 ANKRD31Q8N7Z5 1873 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 LRIT2A6NDA9 550 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 DLGAP1O14490 977 aa4.98□□□□□ -1.61
LRP6-203ENST00000538239 HSPB6O14558 160 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms