RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 DBIP07108 87 aaKnown RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 CASP3P42574 277 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 CLRN1P58418 232 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 RHAGQ02094 409 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 TIGD3Q6B0B8 471 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 CBR4Q8N4T8 237 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 MORN4Q8NDC4 146 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 OR8K3Q8NH51 312 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 SMAP2Q8WU79 429 aaPredicted RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 UBL7Q96S82 380 aaPredicted RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 NPLQ9BXD5 320 aaPredicted RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 CRLF2Q9HC73 371 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 NOSIPQ9Y314 301 aaKnown RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 TMED7Q9Y3B3 224 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 NEUROG3Q9Y4Z2 214 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 ZC3H12DA2A288 527 aaKnown RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 PROB1E7EW31 1015 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 HPP00738 406 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 PDGFAP04085 211 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 IDH3GP51553 393 aaPredicted RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 TUBA3CQ13748 450 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 EFR3AQ14156 821 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 ENTPD8Q5MY95 495 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 YOD1Q5VVQ6 348 aaPredicted RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 ARHGAP11AQ6P4F7 1023 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 TUBA3EQ6PEY2 450 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 NKAIN4Q8IVV8 208 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 PIK3C3Q8NEB9 887 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 ZFP90Q8TF47 636 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 SARAFQ96BY9 339 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 SIKE1Q9BRV8 207 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 ACSS1Q9NUB1 689 aaPredicted RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 USE1Q9NZ43 259 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 ADAM29Q9UKF5 820 aa6.6□□□□□ -1.35
MSH6-209ENST00000538136 GPR55Q9Y2T6 319 aaPredicted RBP6.6□□□□□ -1.35
MSH6-209ENST00000538136 LRRK1Q38SD2 2015 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 PHF3Q92576 2039 aaKnown RBP6.59□□□□□ -1.35
MSH6-209ENST00000538136 GCN1Q92616 2671 aaKnown RBP6.59□□□□□ -1.35
MSH6-209ENST00000538136 OR2M5A3KFT3 312 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 EFCAB9A8MZ26 197 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 PRSS44E7EML9 344 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 BCAS2O75934 225 aaPredicted RBP6.59□□□□□ -1.35
MSH6-209ENST00000538136 AGR2O95994 175 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 SPARCP09486 303 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 ZCCHC18P0CG32 403 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 NR4A1P22736 598 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 GSTM2P28161 218 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 RASGEF1BQ0VAM2 473 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 ST3GAL3Q11203 375 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 OR1Q1Q15612 314 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 XKR7Q5GH72 579 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 B3GNT6Q6ZMB0 384 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 KCTD8Q6ZWB6 473 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 AAED1Q7RTV5 226 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 OR10H4Q8NGA5 316 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 OR4K5Q8NGD3 323 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 COQ8BQ96D53 544 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 SLC41A3Q96GZ6 507 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 DACH2Q96NX9 599 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 TSSK2Q96PF2 358 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 PITHD1Q9GZP4 211 aaPredicted RBP6.59□□□□□ -1.35
MSH6-209ENST00000538136 UCK1Q9HA47 277 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 KRCC1Q9NPI7 259 aaPredicted RBP6.59□□□□□ -1.35
MSH6-209ENST00000538136 GRHPRQ9UBQ7 328 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 MAGEL2Q9UJ55 1249 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 OAZ3Q9UMX2 235 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 PCDHGA7Q9Y5G6 932 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 FREM1Q5H8C1 2179 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 SMIM30A4D0T7 59 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 A6NIN4 97 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 BBIP1A8MTZ0 92 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 SLC2A1P11166 492 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 CCL2P13500 99 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 ZNF823P16415 610 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 GALNSP34059 522 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 TRHRP34981 398 aaPredicted RBP6.59□□□□□ -1.35
MSH6-209ENST00000538136 CBFBQ13951 182 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 HYAL4Q2M3T9 481 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 RFX4Q33E94 735 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 SLC36A3Q495N2 470 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 NPSR1Q6W5P4 371 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 GDF7Q7Z4P5 450 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 PIGWQ7Z7B1 504 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 C17orf82Q86X59 251 aaPredicted RBP6.59□□□□□ -1.35
MSH6-209ENST00000538136 ZNF611Q8N823 705 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 SDR9C7Q8NEX9 313 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 OR10G2Q8NGC3 310 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 OR13C2Q8NGS9 318 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 BBS10Q8TAM1 723 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 NPRL2Q8WTW4 380 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 TMEM255BQ8WV15 326 aa6.59□□□□□ -1.35
MSH6-209ENST00000538136 ZNF717Q9BY31 904 aaPredicted RBP6.59□□□□□ -1.35
MSH6-209ENST00000538136 ZNF443Q9Y2A4 671 aaPredicted RBP6.59□□□□□ -1.35
MSH6-209ENST00000538136 A0A1W2PPK0 400 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 G3V2T6 193 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 M0R082 166 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 TLX2O43763 284 aaPredicted RBP6.59□□□□□ -1.36
MSH6-209ENST00000538136 PIP5K1CO60331 668 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 SLC19A2O60779 497 aa6.59□□□□□ -1.36
MSH6-209ENST00000538136 MITFO75030 526 aaPredicted RBP6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms