RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 CENPAP49450 140 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 CAV3P56539 151 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 RHAGQ02094 409 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 ZNF91Q05481 1191 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 GLYR1Q49A26 553 aaPredicted RBP9.91□□□□□ -0.82
CLIP1-210ENST00000538120 TCTE1Q5JU00 501 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 NPSR1Q6W5P4 371 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 WDR88Q6ZMY6 472 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 THNSL2Q86YJ6 484 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 NRMQ8IXM6 262 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 OR51Q1Q8NH59 317 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 PIGXQ8TBF5 258 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 UBASH3BQ8TF42 649 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 CD180Q99467 661 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 UQCC2Q9BRT2 126 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 CMAHPQ9Y471 501 aa9.91□□□□□ -0.82
CLIP1-210ENST00000538120 PCDH15Q96QU1 1955 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 A0A1W2PQL4 384 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-210ENST00000538120 B4DXG7 233 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 CLPSP04118 112 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 FPR3P25089 353 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 CD1CP29017 333 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 IFNGR2P38484 337 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 KIR2DL3P43628 341 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 SKP1P63208 163 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 HNRNPA0Q13151 305 aaKnown RBP9.9□□□□□ -0.82
CLIP1-210ENST00000538120 ZNF267Q14586 743 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-210ENST00000538120 OR1Q1Q15612 314 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 C22orf42Q6IC83 251 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 TSSK4Q6SA08 328 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 NOXA1Q86UR1 476 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 PHC2Q8IXK0 858 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 CADM2Q8N3J6 435 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 SYT14Q8NB59 555 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 OR9Q1Q8NGQ5 310 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 ADAMTS18Q8TE60 1221 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 ARSGQ96EG1 525 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 TMEM80Q96HE8 168 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 CACYBPQ9HB71 228 aaKnown RBP9.9□□□□□ -0.82
CLIP1-210ENST00000538120 ZNF223Q9UK11 482 aaPredicted RBP9.9□□□□□ -0.82
CLIP1-210ENST00000538120 STUB1Q9UNE7 303 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 MRPS33Q9Y291 106 aaKnown RBP9.9□□□□□ -0.82
CLIP1-210ENST00000538120 EML5Q05BV3 1969 aa9.9□□□□□ -0.82
CLIP1-210ENST00000538120 H0YIG0 161 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 ERVH48-1M5A8F1 160 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 PLA2G10O15496 165 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 NUDT21O43809 227 aaKnown RBP9.9□□□□□ -0.83
CLIP1-210ENST00000538120 ALX3O95076 343 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 GUSBP08236 651 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 PTNP21246 168 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 DRD5P21918 477 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 IFNA8P32881 189 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 CSF2RBP32927 897 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 STAT5AP42229 794 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 GPR4P46093 362 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 SMSP52788 366 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 GAS1P54826 345 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 SCN1BQ07699 218 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 FUT7Q11130 342 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 SYT14P1Q58G82 188 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 FAM209AQ5JX71 171 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 RANBP3LQ86VV4 465 aaPredicted RBP9.9□□□□□ -0.83
CLIP1-210ENST00000538120 ZSCAN1Q8NBB4 408 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 PLPP7Q8NBV4 271 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 TOR1AIP2Q8NFQ8 470 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 OR7G1Q8NGA0 311 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 CNOT9Q92600 299 aaKnown RBP9.9□□□□□ -0.83
CLIP1-210ENST00000538120 ZNF582Q96NG8 517 aaPredicted RBP9.9□□□□□ -0.83
CLIP1-210ENST00000538120 DGAT2Q96PD7 388 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 TSSK6Q9BXA6 273 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 ERVMER34-1Q9H9K5 563 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 LANCL2Q9NS86 450 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 TXNL4BQ9NX01 149 aaKnown RBP9.9□□□□□ -0.83
CLIP1-210ENST00000538120 NDUFB11Q9NX14 153 aa9.9□□□□□ -0.83
CLIP1-210ENST00000538120 PLEKHB1Q9UF11 243 aaPredicted RBP9.9□□□□□ -0.83
CLIP1-210ENST00000538120 A0A0G2JMP0 313 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 SLC35F4A4IF30 521 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 TRAPPC13A5PLN9 417 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 CCDC182A6NF36 153 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 FABP12A6NFH5 140 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 CLDN4O14493 209 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 CDC42EP2O14613 210 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 ZNF749O43361 778 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 ADAM11O75078 769 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 GNSP15586 552 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 GPLD1P80108 840 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 RUNX1T1Q06455 604 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 GRM7Q14831 915 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 NCF4Q15080 339 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.89□□□□□ -0.83
CLIP1-210ENST00000538120 YIF1BQ5BJH7 314 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 PDZK1Q5T2W1 519 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 PRAMEF17Q5VTA0 474 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 MEDAGQ5VYS4 303 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 IGF2-ASQ6U949 168 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 NANOGP1Q8N7R0 232 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 ZNF615Q8N8J6 731 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 RCBTB1Q8NDN9 531 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 OR4Q3Q8NH05 313 aa9.89□□□□□ -0.83
CLIP1-210ENST00000538120 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms